Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20parva_20[genbank_20GCA_5F000165365.1_202005-06-30] 9 sequences; 8,347,606 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq3 120 2e-22 >seq3 Length=1317241 Score = 120 bits (132), Expect = 2e-22 Identities = 214/310 (69%), Gaps = 2/310 (1%) Strand=Plus/Plus Query 25915 ATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCT 25974 |||| ||||||| | ||| || | ||||| ||||||| || || |||||||| || Sbjct 1116187 ATTTGCCTCAACTCGTTTCATGAACAGGTCTGGGATCCACAGCGCGTAGAATAAATCCCT 1116246 Query 25975 CGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGA 26034 || | | |||||| ||||| || || | |||||||| || | |||||||| | Sbjct 1116247 TGCACGCTGGTCTTCTGCGCCGTGGTTTTTCCTGAGATCTAACAACTTGAAAATATCCGC 1116306 Query 26035 GTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTAC 26094 ||||| || || | ||| || ||||| ||||| | |||||| |||||||| || || Sbjct 1116307 ATGCCAAGGCTCCAGATATATCGCAAATGAGCCTTTACGTTTTCCACCACCTTGGTCCAC 1116366 Query 26095 GTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAAT-CCGT 26153 ||| | || || | || || | |||| ||| || || | ||| |||| |||| |||| Sbjct 1116367 GTACTTGGCCGTCGCGTTAAATATCTTCAGCATGGGCACGA-TCCCGTTGGAAATGCCGT 1116425 Query 26154 TTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCAC 26213 | |||| ||| | ||||| | | ||| || | |||| || |||||||||| Sbjct 1116426 TGGTGCCCCTAATGTATGATCCGCTGGCTCTGATTTTGTGAATTGCAAGTCCGATTCCAC 1116485 Query 26214 CAGCCCATTT 26223 | || |||| Sbjct 1116486 CGGCTGATTT 1116495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039972244675