Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20parva_20[genbank_20GCA_5F000165365.1_202005-06-30] 9 sequences; 8,347,606 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq1 122 2e-22 >seq1 Length=2540030 Score = 122 bits (134), Expect = 2e-22 Identities = 171/240 (71%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| ||||| ||||| | || ||| || | ||| | || ||| || ||||| Sbjct 1523554 AATTTGCATACCTCCTCTGAGTCTAAGCACTAAATGTAGGGTGCTCTCCTTCTGGATATT 1523613 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| | |||||| ||| |||| || || || ||||| || || |||||||| Sbjct 1523614 GTAGTCACTGAGTGTTCTACCATCCTCTAGCTGCTTACCAGCAAATATCAACCTCTGTTG 1523673 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || ||||| |||||||| ||||| || || || | || | ||| || || ||| Sbjct 1523674 GTCTGGAGGAATTCCTTCCTTATCCTGAATCTTAGCCTTAACATTCTCTATCGTGTCGCT 1523733 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || |||||| || || ||||||||||| ||||||| ||||| || ||||| ||||| || Sbjct 1523734 AGGCTCAACCTCGAGGGTTATAGTTTTTCCTGTTAAAGTTTTGACGAATATCTGCATATT 1523793 Score = 118 bits (130), Expect = 2e-21 Identities = 166/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||| | ||| | ||||| | ||| | ||| || || || || ||||| Sbjct 2214226 ATTCCACCACGCAACCTCAGTACTAAATGAAGGGTACTTTCCTTTTGGATGTTGTAGTCA 2214285 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || || ||| ||| ||||| || || || ||||| || || |||||||| || ||| Sbjct 2214286 CTCAAAGTCCTACCATCCTCTAACTGCTTACCAGCAAATATCAACCTCTGTTGGTCTGGA 2214345 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| |||||||| || || | || | ||| || || ||| || |||| Sbjct 2214346 GGGATGCCTTCCTTATCTTGAATCTTAGCCTTAACATTCTCTATCGTGTCGCTAGGCTCA 2214405 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || || ||||||||||| ||||||| ||||| || ||||||||||| || Sbjct 2214406 ACCTCGAGGGTTATAGTTTTTCCTGTTAAAGTTTTGACGAATATTTGCATCTT 2214458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899654298788880