Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20parva_20[genbank_20GCA_5F000165365.1_202005-06-30] 9 sequences; 8,347,606 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 6e-14 >seq1 Length=2540030 Score = 93.3 bits (102), Expect = 6e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 || ||||| ||||| | ||||| || || ||||||||||| || | || || || | Sbjct 1523793 AATATGCAGATATTCGTCAAAACTTTAACAGGAAAAACTATAACCCTCGAGGTTGAGCCT 1523734 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 || | || || || || ||| || || ||||| ||||| || |||||||| Sbjct 1523733 AGCGACACGATAGAGAATGTTAAGGCTAAGATTCAGGATAAGGAAGGAATTCCTCCAGAC 1523674 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 ||||| || ||||| | ||| ||||||||||| || ||| ||||| | || || Sbjct 1523673 CAACAGAGGTTGATATTTGCTGGTAAGCAGCTAGAGGATGGTAGAACACTCAGTGACTAC 1523614 Query 156000 AATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 ||||| || ||| || || ||||||||| | ||| | ||||| ||| Sbjct 1523613 AATATCCAGAAGGAGAGCACCCTACATTTAGTGCTTAGACTCAGAGGAGGT 1523563 Score = 93.3 bits (102), Expect = 6e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 || ||||||||||| | ||||| || || ||||||||||| || | || || || | Sbjct 2214458 AAGATGCAAATATTCGTCAAAACTTTAACAGGAAAAACTATAACCCTCGAGGTTGAGCCT 2214399 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 || | || || || || ||| || |||||||| |||||||| |||||||| Sbjct 2214398 AGCGACACGATAGAGAATGTTAAGGCTAAGATTCAAGATAAGGAAGGCATCCCTCCAGAC 2214339 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 ||||| || ||||| | ||| ||||||||| | || ||| || ||||| || || Sbjct 2214338 CAACAGAGGTTGATATTTGCTGGTAAGCAGTTAGAGGATGGTAGGACTTTGAGTGACTAC 2214279 Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGT 156031 | | ||||||| || || ||||||||||| Sbjct 2214278 A--ACATCCAAAAGGAAAGTACCCTTCATTTAGT 2214247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731871917664400