Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20parva_20[genbank_20GCA_5F000165365.1_202005-06-30] 9 sequences; 8,347,606 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 5e-12 >seq1 Length=2540030 Score = 86.0 bits (94), Expect = 5e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 || ||||||||||| |||||||||||||| || ||||| || ||| |||| |||||| Sbjct 2214458 AAGATGCAAATATTCGTCAAAACTTTAACAGGAAAAACTATAACCCTCGAGGTTGAGCCT 2214399 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 ||| || | | | || || |||||| || || |||||| | || || Sbjct 2214398 AGCGACACGATAGAGAATGTTAAGGCTAAGATTCAAGATAAGGAAGGCATCCCTCCAGAC 2214339 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 ||||| || | || | ||| ||||| ||| | ||||||| || || || || ||| Sbjct 2214338 CAACAGAGGTTGATATTTGCTGGTAAGCAGTTAGAGGATGGTAGGACTTTGAGTGACTAC 2214279 Query 110450 AACATTCAAAAAGAA 110464 ||||| ||||| ||| Sbjct 2214278 AACATCCAAAAGGAA 2214264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841554716437