Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20parva_20[genbank_20GCA_5F000165365.1_202005-06-30] 9 sequences; 8,347,606 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq8 104 4e-16 >seq8 Length=1835834 Score = 104 bits (114), Expect = 4e-16 Identities = 165/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 1485475 TTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATC 1485534 ||||||||||| ||||| || |||||||||||||| |||| |||||||| | | | Sbjct 791883 TTGGTGACGGCTTTGGTGCCTTCTGAGACGGCGTGTTTGGCGAGTTCGCCTGGAAGTACG 791942 Query 1485535 AGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGC- 1485593 || | |||||||| || | |||||||| || || || | |||||| || | || Sbjct 791943 AGCCTGACGGCGGTTTGAACCTCGCGGGAGCTGAGGGTTTCCTTCTTGTT-GTACTTGCA 792001 Query 1485594 CAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGAT 1485653 || ||| ||||| ||| ||| |||| |||| | ||||||||||| | | Sbjct 792002 GAGCTTGCCAGCCTCAGTGGCGAGCTTCTCGAAAGTGTCAGTCACAAACGAGTTAAGCAC 792061 Query 1485654 CGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 | ||||||| || || || | ||| || || || |||||||| |||||||| Sbjct 792062 CAACATCGACTTCTTTGACACACCCGTATCCGGATGAACCTGCTTCAGCACCTT 792115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916245442628951