Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20parva_20[genbank_20GCA_5F000165365.1_202005-06-30] 9 sequences; 8,347,606 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 1e-14 >seq1 Length=2540030 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| | |||||| || || | || | || ||| ||||| ||||||||||||||||| Sbjct 2214301 TCCTCTAACTGCTTACCAGCAAATATCAACCTCTGTTGGTCTGGAGGGATGCCTTCCTTA 2214360 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||| ||| | | ||| | ||||||| | ||||| || |||| ||| | Sbjct 2214361 TCTTGAATCTTAGCCTTAACATTCTCTATCGTGTCGCTAGGCTCAACCTCGAGGGTTATA 2214420 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || | |||||| ||||| || ||||| Sbjct 2214421 GTTTTTCCTGTTAAAGTTTTGACGAATATTTGCAT 2214455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420745615160