Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20parva_20[genbank_20GCA_5F000165365.1_202005-06-30] 9 sequences; 8,347,606 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-17 >seq1 Length=2540030 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 134522 TTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAA 134581 ||||||||| ||||||||||| | | || | || || | ||| || || ||||| Sbjct 2214264 TTCCTTTTGGATGTTGTAGTCACTCAAAGTCCTACCATCCTCTAACTGCTTACCAGCAAA 2214323 Query 134582 AATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGC 134641 ||||| | ||| || || || || |||||||| || |||||||| || || || Sbjct 2214324 TATCAACCTCTGTTGGTCTGGAGGGATGCCTTCCTTATCTTGAATCTTAGCCTTAACATT 2214383 Query 134642 GTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAAC 134701 || | |||||| | || || ||||| || || ||||| || ||||||||||| || Sbjct 2214384 CTCTATCGTGTCGCTAGGCTCAACCTCGAGGGTTATAGTTTTTCCTGTTAAAGTTTTGAC 2214443 Query 134702 GAAAATTTGCATTTTGT 134718 ||| |||||||| |||| Sbjct 2214444 GAATATTTGCATCTTGT 2214460 Score = 102 bits (112), Expect = 8e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||||||||||| | ||| | ||||| ||| ||||| || || |||||||| | Sbjct 1523564 CCTCCTCTGAGTCTAAGCACTAAATGTAGGGTGCTCTCCTTCTGGATATTGTAGTCACTG 1523623 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | || || ||||| || || ||||| ||||| | ||| || || || || Sbjct 1523624 AGTGTTCTACCATCCTCTAGCTGCTTACCAGCAAATATCAACCTCTGTTGGTCTGGAGGA 1523683 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || || ||||| || || || || | |||||| | || || Sbjct 1523684 ATTCCTTCCTTATCCTGAATCTTAGCCTTAACATTCTCTATCGTGTCGCTAGGCTCAACC 1523743 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||||| || || ||||| || ||||||||||| ||||| || ||||| ||| Sbjct 1523744 TCGAGGGTTATAGTTTTTCCTGTTAAAGTTTTGACGAATATCTGCATATTG 1523794 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||||||||| | ||| || | ||| |||||| |||||| || ||||||||||| | Sbjct 1523336 CCTCCTCTGAGCCTCAAAACCAAGTGAAGCGTGCTTTCCTTCTGGATGTTGTAGTCACTC 1523395 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | || || | ||| || || ||||| ||||| | ||| || || || || Sbjct 1523396 AAAGTCCTACCATCCTCTAACTGCTTACCAGCAAATATCAACCTCTGTTGGTCTGGAGGA 1523455 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || || ||||| || || || || | |||||| | || || Sbjct 1523456 ATTCCTTCCTTATCCTGAATCTTAGCCTTAACATTCTCTATCGTGTCGCTAGGCTCAACC 1523515 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || || || || | |||||||| ||||||||||| Sbjct 1523516 TCGAGGGTTATAGTCTTGCCAGTGAGGGTTTTAACAAAAATTTGCAT 1523562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398343142680