Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20parva_20[genbank_20GCA_5F000165365.1_202005-06-30] 9 sequences; 8,347,606 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 7e-16 >seq1 Length=2540030 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| |||||||||||||| || || || || || ||||| ||||| | | Sbjct 1523562 ATGCAAATTTTTGTTAAAACCCTCACTGGCAAGACTATAACCCTCGAGGTTGAGCCTAGC 1523503 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| |||| | || ||| || || ||||| | || ||||| || Sbjct 1523502 GACACGATAGAGAATGTTAAGGC-TAAGATTCAGGATAAGGAAGGAATTCCTCCAGACCA 1523444 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | || |||||||| || || || | || || | | ||||| | || ||||| Sbjct 1523443 ACAGAGGTTGATATTTGCTGGTAAGCAGTTAGAGGATGGTAGGACTTTGAGTGACTACAA 1523384 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || || ||| | || || ||||| ||| | ||||||| Sbjct 1523383 CATCCAGAAGGAAAGCACGCTTCACTTGGTTTTGAGGCTCAGAGGAGG 1523336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009562924572