Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theileria_20parva_20[genbank_20GCA_5F000165365.1_202005-06-30] 9 sequences; 8,347,606 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1 100 7e-16 >seq1 Length=2540030 Score = 100 bits (110), Expect = 7e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 151890 CTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCA 151949 || || || | |||||| ||| || |||||||||||||| || ||||| || ||| Sbjct 2214241 CTCAGTACTAAATGAAGGGTACTTTCCTTTTGGATGTTGTAGTCACTCAAAGTCCTACCA 2214300 Query 151950 TCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009 || |||| || || || || || | |||||| ||||| | | ||| |||||||| Sbjct 2214301 TCCTCTAACTGCTTACCAGCAAATATCAACCTCTGTTGGTCTGGAGGGATGCCTTCCTTA 2214360 Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069 |||||||| || || ||| |||||| |||| | ||| || || || || ||| Sbjct 2214361 TCTTGAATCTTAGCCTTAACATTCTCTATCGTGTCGCTAGGCTCAACCTCGAGGGTTATA 2214420 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 ||||| || || | ||| || ||||| | ||||| || Sbjct 2214421 GTTTTTCCTGTTAAAGTTTTGACGAATATTTGCATCTT 2214458 Score = 98.7 bits (108), Expect = 2e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 |||||||| || || | ||| || || ||| || ||||| ||||| || | ||| Sbjct 1523570 CTGAGTCTAAGCACTAAATGTAGGGTGCTCTCCTTCTGGATATTGTAGTCACTGAGTGTT 1523629 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || ||||| ||||| || || || || || | |||||| ||||| | | |||||| Sbjct 1523630 CTACCATCCTCTAGCTGCTTACCAGCAAATATCAACCTCTGTTGGTCTGGAGGAATTCCT 1523689 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| || ||||| || || ||| |||||| |||| | ||| || || || Sbjct 1523690 TCCTTATCCTGAATCTTAGCCTTAACATTCTCTATCGTGTCGCTAGGCTCAACCTCGAGG 1523749 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC 152110 || |||||||| || || | ||| || ||||| | |||||| || || Sbjct 1523750 GTTATAGTTTTTCCTGTTAAAGTTTTGACGAATATCTGCATATTGCC 1523796 Score = 84.2 bits (92), Expect = 5e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 151914 TCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAG 151973 || || ||||||||||| || ||||| || ||||| |||| || || || || Sbjct 1523372 TCCTTCTGGATGTTGTAGTCACTCAAAGTCCTACCATCCTCTAACTGCTTACCAGCAAAT 1523431 Query 151974 ATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTC 152033 || | |||||| ||||| | | ||||||||||| || ||||| || || ||| || Sbjct 1523432 ATCAACCTCTGTTGGTCTGGAGGAATTCCTTCCTTATCCTGAATCTTAGCCTTAACATTC 1523491 Query 152034 TCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACG 152093 |||| |||| | ||| || || || || ||||| ||||| ||||| || || || Sbjct 1523492 TCTATCGTGTCGCTAGGCTCAACCTCGAGGGTTATAGTCTTGCCAGTGAGGGTTTTAACA 1523551 Query 152094 AAGACCTGCAT 152104 || | ||||| Sbjct 1523552 AAAATTTGCAT 1523562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820666950039