Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq940 89.7 5e-13 >seq940 Length=92775 Score = 89.7 bits (98), Expect = 5e-13 Identities = 179/259 (69%), Gaps = 10/259 (4%) Strand=Plus/Minus Query 119783 TTCATATATCGTATCTTTCCGAACACGGTACGTTCCTTCCACGCTCTG-TCGTGGAGCCC 119841 ||||| |||| || || |||||||| | || ||||| | | ||| ||||||| | | Sbjct 76353 TTCATGTATCTGATTTTGCCGAACACAGGCCGCTCCTTGAAACC-CTGATCGTGGA-CAC 76296 Query 119842 CGCTACGGC-CCATAGGCATCCC---ACGTATCCGTTGGGATCCGTTCCATCTAACTCGT 119897 ||| | | ||| | ||| ||| ||| |||||||| || || ||||| || | || Sbjct 76295 CGCAAATACTCCACATGCAGCCCGTCACG---CCGTTGGGGTCAGTGCCATCCAAGTGGT 76239 Query 119898 ATTTATCGTTTAAGTAGATACAGACGCTTAACGCACTTTCAGGAGTCTCGCTCCATTCCA 119957 | || || || || ||| | | ||||| || || | || ||||||||| Sbjct 76238 ACTTGTCATTCAAAGCGATGGCAATCTTCAACGCTTCTTGCGGTGACTTTGTCCATTCCA 76179 Query 119958 GTAtttttttAGCCCAGTACATACGTAAGTATCCATGCATTTTACCTTCACGAACCATTT 120017 | || ||||| ||||||||||| | | ||| ||||||||||| || || || || | || Sbjct 76178 GGATCTTTTTGGCCCAGTACATTCTCAGGTACCCATGCATTTTCCCGTCCCGTACTAGTT 76119 Query 120018 GAAGTTGTGCGGCGTTCCA 120036 | ||||| || || ||||| Sbjct 76118 GTAGTTGCGCAGCATTCCA 76100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517508614897560