Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1184 98.7 1e-15 >seq1184 Length=60283 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/225 (70%), Gaps = 3/225 (1%) Strand=Plus/Minus Query 145689 CTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTC 145748 ||| || ||||| |||||| |||| || ||||| || ||| ||||| ||| || | Sbjct 56426 CTCGACATGGTTCGTGTAGACATGCGTGTTCCCCATGAAGTGAATGAACTCCTTAGGTTT 56367 Query 145749 GAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGG 145808 ||| || ||| || |||||| |||| || || ||| || ||||||||||| Sbjct 56366 TAGGTTGCAGACGTGTGCAACCATGAGCGTCAAAAGCGAATAGGAAGCGATGTTGAAGGG 56307 Query 145809 CACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCC--CCGCCC 145866 || || || || | || | ||| ||||| |||| ||| || |||||| | | | Sbjct 56306 GACGCCGAGGCCGACATCGCACGACCGCTGATACATGATGCACGACAGCTCCTTCTGGTC 56247 Query 145867 G-CCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 | ||||||||||||||||| | ||| || |||||||| ||||| Sbjct 56246 GTTCACGTAGAACTGGCACAACAAGTGACAAGGCGGCAGCGCCAT 56202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590034631636680