Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq1347 118 9e-22 seq1346 118 9e-22 seq1348 113 4e-20 seq687 89.7 4e-13 >seq1347 Length=520 Score = 118 bits (130), Expect = 9e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 20967 ACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCC 21026 |||| || | ||| |||||||| |||||||| ||||| | ||| ||| || |||||||| Sbjct 210 ACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGTTCGGCCGTCCTCC 151 Query 21027 AGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCG 21086 | ||| ||||| ||| |||| || | |||||| || ||| | ||||||||||| | Sbjct 150 AACTGCTTGCCAGCAAAAATCAGACGCTGCTGATCAGGGGGAATACCTTCCTTGTCCTGG 91 Query 21087 ATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTG 21146 |||||| ||||| | ||| ||||| ||||| || | || |||||||| Sbjct 90 ATCTTTGCCTTCACGTTCTCGATGGTATCTGACGGCTCAACATCAAGCGTGATGGTCTTC 31 Query 21147 CCGGTTAACGTTTTGACAAATATTTGCATT 21176 ||||| | || || ||||| || |||||| Sbjct 30 CCGGTAAGAGTCTTCACAAAGATCTGCATT 1 Score = 118 bits (130), Expect = 9e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 20967 ACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCC 21026 |||| || | ||| |||||||| |||||||| ||||| | ||| ||| || |||||||| Sbjct 438 ACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGTTCGGCCGTCCTCC 379 Query 21027 AGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCG 21086 | ||| ||||| ||| |||| || | |||||| || ||| | ||||||||||| | Sbjct 378 AACTGCTTGCCAGCAAAAATCAGACGCTGCTGATCAGGGGGAATACCTTCCTTGTCCTGG 319 Query 21087 ATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTG 21146 |||||| ||||| | ||| ||||| ||||| || | || |||||||| Sbjct 318 ATCTTTGCCTTCACGTTCTCGATGGTATCTGACGGCTCAACATCAAGCGTGATGGTCTTC 259 Query 21147 CCGGTTAACGTTTTGACAAATATTTGCATT 21176 ||||| | || || ||||| || |||||| Sbjct 258 CCGGTAAGAGTCTTCACAAAGATCTGCATT 229 >seq1346 Length=13467 Score = 118 bits (130), Expect = 9e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 20967 ACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCC 21026 |||| || | ||| |||||||| |||||||| ||||| | ||| ||| || |||||||| Sbjct 13306 ACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGTTCGGCCGTCCTCC 13247 Query 21027 AGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCG 21086 | ||| ||||| ||| |||| || | |||||| || ||| | ||||||||||| | Sbjct 13246 AACTGCTTGCCAGCAAAAATCAGACGCTGCTGATCAGGGGGAATACCTTCCTTGTCCTGG 13187 Query 21087 ATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTG 21146 |||||| ||||| | ||| || || ||||| || | || |||||||| Sbjct 13186 ATCTTTGCCTTCACGTTCTCGATGGTGTCTGACGGCTCAACATCAAGCGTGATGGTCTTC 13127 Query 21147 CCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 ||||| | || || ||||| || ||||||||| Sbjct 13126 CCGGTAAGAGTCTTCACAAAGATCTGCATTTTG 13094 >seq1348 Length=13918 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 20967 ACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCC 21026 |||| || | ||| |||||||| |||||||| ||||| | ||| ||| || |||||||| Sbjct 283 ACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGTTCGGCCGTCCTCC 224 Query 21027 AGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCG 21086 | ||| ||||| ||| |||| || | |||||| || ||| | ||||||||||| | Sbjct 223 AACTGCTTGCCAGCAAAAATCAGACGCTGCTGATCAGGGGGAATACCTTCCTTGTCCTGG 164 Query 21087 ATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTG 21146 |||||| ||||| | ||| ||||| ||||| || | || |||||||| Sbjct 163 ATCTTTGCCTTCACGTTCTCGATGGTATCTGACGGCTCAACATCAAGCGTGATGGTCTTC 104 Query 21147 CCGGTTAACGTTTTGACAAATATTTGCATT 21176 || || | || || ||||| || |||||| Sbjct 103 CCAGTAAGAGTCTTCACAAAGATCTGCATT 74 >seq687 Length=105670 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 20966 CACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTC 21025 ||||| || | |||||| ||||| || ||||| ||||| | |||||| | ||||||| Sbjct 92673 CACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGGGTTCTGCCGTCCTC 92614 Query 21026 CAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGC 21085 ||||| ||||| || |||| || | ||||||||| || | || ||||| || Sbjct 92613 GAGCTGCTTGCCTGCGAAAATCAGACGCTGCTGGTCAGGCGGAATTCCCTCCTTATCCTG 92554 Query 21086 GATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTT 21145 ||||| || || | ||| || || ||||| |||| || || ||||| Sbjct 92553 AATCTTGGCCTTGACATTTTCGATGGTGTCGGAAGGCTCGACGTCCAAAGTGATCGTCTT 92494 Query 21146 GCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 |||||| | ||| || || || || ||||||||| Sbjct 92493 GCCGGTGAGCGTCTTCACGAAAATCTGCATTTTG 92460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422229778694372