Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq687 132 5e-26 seq1346 95.1 1e-14 seq1348 87.8 2e-12 seq1347 87.8 2e-12 >seq687 Length=105670 Score = 132 bits (146), Expect = 5e-26 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || ||||| || |||||||| ||||| || ||||| | |||||||| | Sbjct 92461 AAAATGCAGATTTTCGTGAAGACGCTCACCGGCAAGACGATCACTTTGGACGTCGAGCCT 92520 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 |||||| | | ||| |||||| || |||| || || ||||| || || | ||| Sbjct 92521 TCCGACACCATCGAAAATGTCAAGGCCAAGATTCAGGATAAGGAGGGAATTCCGCCTGAC 92580 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| || || || | ||| ||||| ||||| || |||| | ||||| ||||||| Sbjct 92581 CAGCAGCGTCTGATTTTCGCAGGCAAGCAGCTCGAGGACGGCAGAACCCTTTCCGACTAC 92640 Query 40867 AACATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||||| |||| || || Sbjct 92641 AACATCCAGAAGGAATCCACTCTCCA 92666 >seq1346 Length=13467 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || || || || || || || || || |||||||| | || || || | Sbjct 13095 AAAATGCAGATCTTTGTGAAGACTCTTACCGGGAAGACCATCACGCTTGATGTTGAGCCG 13154 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||| | | | |||| | |||| ||| || | ||||| || || || ||| | || Sbjct 13155 TCAGACACCATCGAGAACG-TGAAGGCAAAGATCCAGGACAAGGAAGGTATTCCCCCTGA 13213 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 ||||| || || || | || ||||| ||| |||| |||| || || || |||||| Sbjct 13214 TCAGCAGCGTCTGATTTTTGCTGGCAAGCAGTTGGAGGACGGCCGAACTCTGTCCGACTA 13273 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||| ||||||||| | || || || | || ||||| Sbjct 13274 CAACATTCAGAAGGAGTCGACTCTCCACTTGGTTTTGCG 13312 >seq1348 Length=13918 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || || || || || || || || || |||||||| | || || || | | Sbjct 74 AATGCAGATCTTTGTGAAGACTCTTACTGGGAAGACCATCACGCTTGATGTTGAGCCGTC 133 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 || | | | | |||| | |||| ||| || | ||||| || || || ||| | || | Sbjct 134 AGATACCATCGAGAACG-TGAAGGCAAAGATCCAGGACAAGGAAGGTATTCCCCCTGATC 192 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| || || || | || ||||| ||| |||| |||| || || || |||||||| Sbjct 193 AGCAGCGTCTGATTTTTGCTGGCAAGCAGTTGGAGGACGGCCGAACTCTGTCCGACTACA 252 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||| ||||||||| | || || || | || ||||| Sbjct 253 ACATTCAGAAGGAGTCGACTCTCCACTTGGTTTTGCG 289 >seq1347 Length=520 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || || || || || || || || || |||||||| | || || || | | Sbjct 1 AATGCAGATCTTTGTGAAGACTCTTACCGGGAAGACCATCACGCTTGATGTTGAGCCGTC 60 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 || | | | | |||| | |||| ||| || | ||||| || || || ||| | || | Sbjct 61 AGATACCATCGAGAACG-TGAAGGCAAAGATCCAGGACAAGGAAGGTATTCCCCCTGATC 119 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| || || || | || ||||| ||| |||| |||| || || || |||||||| Sbjct 120 AGCAGCGTCTGATTTTTGCTGGCAAGCAGTTGGAGGACGGCCGAACTCTGTCCGACTACA 179 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||| ||||||||| | || || || | || ||||| Sbjct 180 ACATTCAGAAGGAGTCGACTCTCCACTTGGTTTTGCG 216 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || || || || || || || || || |||||||| | || || || | | Sbjct 229 AATGCAGATCTTTGTGAAGACTCTTACCGGGAAGACCATCACGCTTGATGTTGAGCCGTC 288 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 || | | | | |||| | |||| ||| || | ||||| || || || ||| | || | Sbjct 289 AGATACCATCGAGAACG-TGAAGGCAAAGATCCAGGACAAGGAAGGTATTCCCCCTGATC 347 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| || || || | || ||||| ||| |||| |||| || || || |||||||| Sbjct 348 AGCAGCGTCTGATTTTTGCTGGCAAGCAGTTGGAGGACGGCCGAACTCTGTCCGACTACA 407 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||| ||||||||| | || || || | || ||||| Sbjct 408 ACATTCAGAAGGAGTCGACTCTCCACTTGGTTTTGCG 444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515182381147920