Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq2236 93.3 6e-14 >seq2236 Length=21742 Score = 93.3 bits (102), Expect = 6e-14 Identities = 165/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 96806 AACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACG 96865 ||| || ||| || | | |||||| |||| ||||||||| | | ||| | | || Sbjct 13002 AACGAATGGCTACTCGAATGGCCTTCTGCCGATGCTCAGAGTCTTCAACGACGCCGCGCG 12943 Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925 ||||| ||||||||| ||||| |||| | ||| | |||||||||||||| Sbjct 12942 CTACGTCGACCAGGGCGGCGGCAAACGCAAAGGCAGCCTCGCCATTTACTTGGAACCTTG 12883 Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985 |||| || |||||||| || |||| || || ||| |||| |||||| ||| Sbjct 12882 GCACTTTGATGTTTTTGATTTCCTCGACATCAAGAAGAACCATGGCAAGGAAGAGCGACG 12823 Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGA 97045 || | ||| | || | || |||||| | |||||| | |||||| | || || ||||| Sbjct 12822 GGCGCGCGACCTCTTCTGCGCCCTCTGGATCCCAGATCTCTTCATGGAACGTGTGAACGA 12763 Query 97046 C 97046 | Sbjct 12762 C 12762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741006242056920