Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1347 100 3e-16 seq687 100 3e-16 seq1346 98.7 1e-15 seq1348 95.1 1e-14 >seq1347 Length=520 Score = 100 bits (110), Expect = 3e-16 Identities = 143/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || ||||||||||| || | | || || |||| || | ||||||||| Sbjct 198 GTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGTTCGGCCGTCCTCCAACTGCTTGCCA 139 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| |||| || |||||||| || || ||||| ||||| || || || || ||| ||| Sbjct 138 GCAAAAATCAGACGCTGCTGATCAGGGGGAATACCTTCCTTGTCCTGGATCTTTGCCTTC 79 Query 64367 ACAACCTCCACTGTATC-ACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 || ||| | ||||| |||| || || || | || | |||||| ||||| | ||| Sbjct 78 ACGTTCTCGATGGTATCTGACGGC-TCAACATCAAGCGTGATGGTCTTCCCGGTAAGAGT 20 Query 64426 TTTTACGAAAATTTGCATT 64444 || || || || |||||| Sbjct 19 CTTCACAAAGATCTGCATT 1 Score = 100 bits (110), Expect = 3e-16 Identities = 143/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || ||||||||||| || | | || || |||| || | ||||||||| Sbjct 426 GTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGTTCGGCCGTCCTCCAACTGCTTGCCA 367 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| |||| || |||||||| || || ||||| ||||| || || || || ||| ||| Sbjct 366 GCAAAAATCAGACGCTGCTGATCAGGGGGAATACCTTCCTTGTCCTGGATCTTTGCCTTC 307 Query 64367 ACAACCTCCACTGTATC-ACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 || ||| | ||||| |||| || || || | || | |||||| ||||| | ||| Sbjct 306 ACGTTCTCGATGGTATCTGACGGC-TCAACATCAAGCGTGATGGTCTTCCCGGTAAGAGT 248 Query 64426 TTTTACGAAAATTTGCATT 64444 || || || || |||||| Sbjct 247 CTTCACAAAGATCTGCATT 229 >seq687 Length=105670 Score = 100 bits (110), Expect = 3e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| || || |||||||| || | | ||| | |||| || ||||||||||| Sbjct 92660 GTGGATTCCTTCTGGATGTTGTAGTCGGAAAGGGTTCTGCCGTCCTCGAGCTGCTTGCCT 92601 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || |||| || ||||||||||| || |||||||| || || || || || || ||| Sbjct 92600 GCGAAAATCAGACGCTGCTGGTCAGGCGGAATTCCCTCCTTATCCTGAATCTTGGCCTTG 92541 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || || | || || || | ||| | ||||||||||| | || Sbjct 92540 ACATTTTCGATGGTGTCGGAAGGCTCGACGTCCAAAGTGATCGTCTTGCCGGTGAGCGTC 92481 Query 64427 TTTACGAAAATTTGCATTTT 64446 || |||||||| |||||||| Sbjct 92480 TTCACGAAAATCTGCATTTT 92461 >seq1346 Length=13467 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || ||||||||||| || | | || || |||| || | ||||||||| Sbjct 13294 GTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGTTCGGCCGTCCTCCAACTGCTTGCCA 13235 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| |||| || |||||||| || || ||||| ||||| || || || || ||| ||| Sbjct 13234 GCAAAAATCAGACGCTGCTGATCAGGGGGAATACCTTCCTTGTCCTGGATCTTTGCCTTC 13175 Query 64367 ACAACCTCCACTGTATC-ACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 || ||| | || || |||| || || || | || | |||||| ||||| | ||| Sbjct 13174 ACGTTCTCGATGGTGTCTGACGGC-TCAACATCAAGCGTGATGGTCTTCCCGGTAAGAGT 13116 Query 64426 TTTTACGAAAATTTGCATTTT 64446 || || || || |||||||| Sbjct 13115 CTTCACAAAGATCTGCATTTT 13095 >seq1348 Length=13918 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || ||||||||||| || | | || || |||| || | ||||||||| Sbjct 271 GTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGTTCGGCCGTCCTCCAACTGCTTGCCA 212 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| |||| || |||||||| || || ||||| ||||| || || || || ||| ||| Sbjct 211 GCAAAAATCAGACGCTGCTGATCAGGGGGAATACCTTCCTTGTCCTGGATCTTTGCCTTC 152 Query 64367 ACAACCTCCACTGTATC-ACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 || ||| | ||||| |||| || || || | || | |||||| || || | ||| Sbjct 151 ACGTTCTCGATGGTATCTGACGGC-TCAACATCAAGCGTGATGGTCTTCCCAGTAAGAGT 93 Query 64426 TTTTACGAAAATTTGCATT 64444 || || || || |||||| Sbjct 92 CTTCACAAAGATCTGCATT 74 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499609094133480