Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2236 114 1e-20 >seq2236 Length=21742 Score = 114 bits (126), Expect = 1e-20 Identities = 173/246 (70%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 94071 CTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAA 94130 ||||||||| || || |||||| ||| || ||||| | || |||||| | |||||||| Sbjct 13014 CTACATCCGAGGAACGAATGGCTACTCGAATGGCCTTCTGCCGATGCTCAGAGTCTTCAA 12955 Query 94131 CAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTA 94190 | |||| ||||||||||| |||||||| || || | | || || |||| | || Sbjct 12954 CGACGCCGCGCGCTACGTCGACCAGGGCGGCGGCAAACGCAAAGGCAGCCTCGCCATTTA 12895 Query 94191 TCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAA 94250 | || || |||||| || || | |||| ||||| | |||||||| ||||| Sbjct 12894 CTTGGAACCTTGGCACTTTGATGTTTTTGATTTCCTCGACATCAAGAAGAACCATGGCAA 12835 Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 || | |||| | |||||||||| ||| |||||| | ||||| || || ||| | Sbjct 12834 GGAAGAGCGACGGGCGCGCGACCTCTTCTGCGCCCTCTGGATCCCAGATCTCTTCATGGA 12775 Query 94311 ACGCGT 94316 ||| || Sbjct 12774 ACGTGT 12769 Score = 96.9 bits (106), Expect = 3e-15 Identities = 191/280 (68%), Gaps = 2/280 (1%) Strand=Plus/Minus Query 95140 GGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCC 95199 || ||||||||| |||| || || | ||| |||||| | ||| || | || ||| | | Sbjct 10662 GGGAACAACGAGGCGTTTGAGCCGTACACTTCCAACATTTACTACCGCCGAGTGTTGAGC 10603 Query 95200 GGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGG 95259 || || || ||| | || ||||| || || ||| || | || ||||| Sbjct 10602 GGAGAGTTTTTCGTAGTGAATCCACACCTGCTGCGAGACTTGCTCGAGCGGGACCTGTGG 10543 Query 95260 GGTGACAAGGTCAAGAACCAACTGCTACGCGC-CAACGGCTCCGTCCAGAACATCCCGCA 95318 ||| | |||||| | || ||| | |||| ||||||| ||||||||||| Sbjct 10542 TCTGAGGACGTCAAGCAGCAGCTGATT-GCGCACAACGGCAGTGTCCAGAACATGGACGT 10484 Query 95319 AATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGAT 95378 || || || ||| | ||||| || ||||||||||| ||||||||| ||||||||| | Sbjct 10483 CATCCCAGACGACTTGAAGGCACTGTACAAGACCGTTTGGGAGATCAAGCAGCGCGTCGT 10424 Query 95379 ACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAG 95418 ||||||| ||| || ||| | || |||||| |||| Sbjct 10423 CCTCGACCTGGCGATCGACCGGGCACCGTTCATCGACCAG 10384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494687845843320