Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq687 141 9e-29 seq1346 111 2e-19 seq1348 102 8e-17 seq1347 102 8e-17 >seq687 Length=105670 Score = 141 bits (156), Expect = 9e-29 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 |||||||| || ||||| || |||||||| ||||| || ||||| | ||||||||| | Sbjct 92461 AAAATGCAGATTTTCGTGAAGACGCTCACCGGCAAGACGATCACTTTGGACGTCGAGCCT 92520 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 |||||| | | ||| | || | || || | || || ||||||||||| | ||| Sbjct 92521 TCCGACACCATCGAAAATGTCAAGGCCAAGATTCAGGATAAGGAGGGAATTCCGCCTGAC 92580 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| || |||| ||| ||||| ||||| || |||| | ||||| ||||||| Sbjct 92581 CAGCAGCGTCTGATTTTCGCAGGCAAGCAGCTCGAGGACGGCAGAACCCTTTCCGACTAC 92640 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTG 38453 |||||||| |||||| | || || || |||||| Sbjct 92641 AACATCCAGAAGGAATCCACTCTCCACTTGGTG 92673 >seq1346 Length=13467 Score = 111 bits (122), Expect = 2e-19 Identities = 158/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 |||||||| || || || || || || || || || |||||||| | || || ||| | Sbjct 13095 AAAATGCAGATCTTTGTGAAGACTCTTACCGGGAAGACCATCACGCTTGATGTTGAGCCG 13154 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||| | | | |||| | || | ||| |||| ||||| || || |||||| | || Sbjct 13155 TCAGACACCATCGAGAACG-TGAAGGCAAAGATCCAGGACAAGGAAGGTATTCCCCCTGA 13213 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 || ||||| || |||| || ||||| ||| |||| |||| || || || |||||| Sbjct 13214 TCAGCAGCGTCTGATTTTTGCTGGCAAGCAGTTGGAGGACGGCCGAACTCTGTCCGACTA 13273 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| || ||||| |||| || || ||||| ||||| Sbjct 13274 CAACATTCAGAAGGAGTCGACTCTCCACTTGGTTTTGCGT 13313 >seq1348 Length=13918 Score = 102 bits (112), Expect = 8e-17 Identities = 155/218 (71%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || || || || || || || || || |||||||| | || || ||| | | Sbjct 74 AATGCAGATCTTTGTGAAGACTCTTACTGGGAAGACCATCACGCTTGATGTTGAGCCGTC 133 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 || | | | | |||| | || | ||| |||| ||||| || || |||||| | || | Sbjct 134 AGATACCATCGAGAACG-TGAAGGCAAAGATCCAGGACAAGGAAGGTATTCCCCCTGATC 192 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || |||| || ||||| ||| |||| |||| || || || |||||||| Sbjct 193 AGCAGCGTCTGATTTTTGCTGGCAAGCAGTTGGAGGACGGCCGAACTCTGTCCGACTACA 252 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||| || ||||| |||| || || ||||| ||||| Sbjct 253 ACATTCAGAAGGAGTCGACTCTCCACTTGGTTTTGCGT 290 >seq1347 Length=520 Score = 102 bits (112), Expect = 8e-17 Identities = 155/218 (71%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || || || || || || || || || |||||||| | || || ||| | | Sbjct 1 AATGCAGATCTTTGTGAAGACTCTTACCGGGAAGACCATCACGCTTGATGTTGAGCCGTC 60 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 || | | | | |||| | || | ||| |||| ||||| || || |||||| | || | Sbjct 61 AGATACCATCGAGAACG-TGAAGGCAAAGATCCAGGACAAGGAAGGTATTCCCCCTGATC 119 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || |||| || ||||| ||| |||| |||| || || || |||||||| Sbjct 120 AGCAGCGTCTGATTTTTGCTGGCAAGCAGTTGGAGGACGGCCGAACTCTGTCCGACTACA 179 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||| || ||||| |||| || || ||||| ||||| Sbjct 180 ACATTCAGAAGGAGTCGACTCTCCACTTGGTTTTGCGT 217 Score = 102 bits (112), Expect = 8e-17 Identities = 155/218 (71%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || || || || || || || || || |||||||| | || || ||| | | Sbjct 229 AATGCAGATCTTTGTGAAGACTCTTACCGGGAAGACCATCACGCTTGATGTTGAGCCGTC 288 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 || | | | | |||| | || | ||| |||| ||||| || || |||||| | || | Sbjct 289 AGATACCATCGAGAACG-TGAAGGCAAAGATCCAGGACAAGGAAGGTATTCCCCCTGATC 347 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || |||| || ||||| ||| |||| |||| || || || |||||||| Sbjct 348 AGCAGCGTCTGATTTTTGCTGGCAAGCAGTTGGAGGACGGCCGAACTCTGTCCGACTACA 407 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||| || ||||| |||| || || ||||| ||||| Sbjct 408 ACATTCAGAAGGAGTCGACTCTCCACTTGGTTTTGCGT 445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500137056401280