Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq80 443 3e-119 seq1087 96.9 4e-15 >seq80 Length=143247 Score = 443 bits (490), Expect = 3e-119 Identities = 1207/1837 (66%), Gaps = 56/1837 (3%) Strand=Plus/Plus Query 6343 GTACATCTTTGTAATGATTGGTGTACATACATCTGTAAGTTCCTTCTGTTTAGCCTCAAA 6402 ||||| ||| || ||||||||||| || || || ||||||||| || ||||| || Sbjct 54470 GTACAGCTTGGTGATGATTGGTGTGCAGACGGACTCAACTTCCTTCTGCTTCGCCTCGAA 54529 Query 6403 CTCTTCTGTTTCGGCAGATTGGTTCGCGTCTAACCATTCAAGTACCTCC--GAAACCTTC 6460 || || | || || ||||||| ||| | ||| ||||| ||||| || | | Sbjct 54530 TTCCTCCTTCTCTGCTAGTTGGTTCTTGTCCAGCCAGTCAAGGGCCTCCTGGATGGCCTT 54589 Query 6461 GTTTCGACCGTTTCCTTATCCTCA-------------CCTTCAATCTTTTCGACC----- 6502 ||| | | || || | |||||| |||| || ||| ||| | Sbjct 54590 GTT--GGCAGTGTCTCTGTCCTCAGAGGAGATCTTGTCCTT-AAGCTTCTCGTCATCCAA 54646 Query 6503 -GTTCCTTTCATTTGATAACAGTAGTTTTCGAGACCATTCTTCGCCTCGACCTTTTTCGC 6561 || | |||| || || |||||||| || || |||||||||||||| || | | Sbjct 54647 GGTCTGTCTCATGTGGTAGCAGTAGTTCTCCAGGCCATTCTTCGCCTCCACACGGTGCTT 54706 Query 6562 GTACTTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTC 6621 || || ||| ||||| |||| ||||| || || ||||| ||||| || || ||| Sbjct 54707 GTTCTGTTCGTCTTCGGCTTTGTACTTCTCTGCCTCTTGCACCATGCGGTCGAT---TTC 54763 Query 6622 TTTCGAT---AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGC 6678 || | | ||||| || ||||| || || || | | | || || | || Sbjct 54764 GGACGCACTGAGGCGGCCCTTGTCGTTCGTGATGGTGATTTGGTTGCTCTTTCCGGTGGA 54823 Query 6679 CTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAAT 6738 ||| |||| || | || |||| ||||| || || || | |||||| | || | || Sbjct 54824 CTTGTCTTGCGCTGTGACGTTCATGATACCGTTAGCGTCGATATCGAAAGTGACTTCGAT 54883 Query 6739 TTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACT 6798 ||| || ||| | || |||| || ||||| | | ||| | || || | | Sbjct 54884 TTGGGGGACACCACGGGGGGCGGGGGGGATACCATCCAGGTGGAATTTGCCCAGGAGGTT 54943 Query 6799 GTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATT 6858 ||| || | | | || ||| |||||||| || || | ||| ||| | || || || Sbjct 54944 GTTGTCTTTGGTCATCGCACGCTCACCTTCGTACACCTGAATCAGCACTCCTGGCTGGTT 55003 Query 6859 ATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAAT 6918 || ||| | |||| | || ||||| | || ||||| || ||||| ||| Sbjct 55004 GTCCGCGTACGTGGTGAAGGTCTGAGACTTCTTGGTCGGGATCGTTGTGTTTCTTTCAAT 55063 Query 6919 AACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAA 6978 | | |||||| | |||||| || || || || ||||| ||||| | || |||| Sbjct 55064 CAGCTTGGTCATGACACCACCAGCTGTCTCCAGACCGAGAGAGAGAGGCGCAACATCCAG 55123 Query 6979 GAGTAACAGGTCTTGAAC---AGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGAC 7035 || | || || || || ||| | | || ||| | ||||| || || ||||| Sbjct 55124 AAGAAGCAAATCCTGCACCTGAGAGCTGGTAACT---CCCTTCAAGATCGCTGCCTGGAC 55180 Query 7036 CGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTT 7095 | || ||||| || || |||||||||||||| |||| | | | || || ||||| Sbjct 55181 AGCAGCACCGTACGCAACGGCCTCATCGGGGTTGATCGACCTGCACGGCTCCTTTCCGTT 55240 Query 7096 AAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAAC 7155 || | || | | | || ||||| || ||||| || || |||||||| ||||| || Sbjct 55241 GAAGAAGTCAGTGATGAGCTGCTGAATCTTGGGGATACGGGTAGATCCACCAACCAACAC 55300 Query 7156 GATTTCATTCACTTTCGAT---TTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGG 7212 | ||| | || ||| || || || ||||| || || ||||| || Sbjct 55301 AACTTCGCTGAC---CGAGCGCTTGTCAATACCAGAGTCCTTGAGGACCTTCTCGACGGG 55357 Query 7213 TTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGA 7272 || | || ||||| ||||||| || || |||||||| || ||||| | || || Sbjct 55358 CAACAGGGAGTTGCGGAAGTAGTCCATGCAAAGCTCCTCAAAGCGCGCACGAGAGATAGA 55417 Query 7273 TGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGA 7332 | || | |||| ||| || | | || |||||||| ||||||| || | | Sbjct 55418 CACAGAGTAGTCAATGCCCTCAAAAAGAGAGTCAATTTCGATGGTTGCCTGAGTGCTGCT 55477 Query 7333 AGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTT 7392 ||| | |||| ||| | |||||| ||| || || | |||||||||||||| ||| Sbjct 55478 AGAGAGAGTTCTCTTGGTGCGCTCGCACTGGGTACGCAGGCGACGAAGGGCACGGCTGTT 55537 Query 7393 ACCGGAAATATC-TTTCTTATGTT--TACGTTTAAACTCTT---CAGAGAAGTGT-CGAA 7445 | || || |||| ||| | || || || || | | |||||| | || Sbjct 55538 GGTGCTGATGTCCTTTCCGCGGTTCTTGCGCTTGAAGTCCTGGACGCAGAAGTCCACCAA 55597 Query 7446 GGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTT 7505 || ||||||||||||||||| | || || || || ||||| || ||||||| Sbjct 55598 ACGGTTG----TCGAAATCTTCACCACCAAGATGGGTGTCACCAGCGGTGGCCTTGACTT 55653 Query 7506 CAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAA 7565 |||||||||| |||| || | | || ||| ||||| |||||||| ||||||| ||| | Sbjct 55654 CAAAGATACCGTCTTCGATTGTAAGCAGCGACACATCGAACGTACCGCCACCCATGTCGA 55713 Query 7566 AAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCG 7625 | ||||| |||||| | || || ||||| || ||||| || || || || |||| Sbjct 55714 AGATGAGGACGTTCATCTCACCGCAGCCCTTCTTGTCCAGACCATAAGCAATGGCAGCCG 55773 Query 7626 CCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCG 7685 | || || || || ||||| || || | | ||||| ||||| || | ||||| || | Sbjct 55774 CTGTGGGCTCGTTGATAATGCGGAGGACGCTGAGGCCGGCAATGGTACCAGCATCCTTGG 55833 Query 7686 TCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTT 7745 | || || || ||||||||||| ||||| || || || || | ||| || ||| | |||| Sbjct 55834 TAGCCTGACGCTGCGAATCGTTGAAGTACGCAGGAACGGTAATGACGGCCTCCTTCACTT 55893 Query 7746 TCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCT 7805 ||| ||||| || | |||||||| || ||||||||| | |||||| | |||| || Sbjct 55894 CCTTGCCGAGGTAAGCCTCCGCGATTTCCTTCATTTTGCCCAAAACCATGGCGGAAACCT 55953 Query 7806 CTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCG 7865 |||||| ||| ||| | || || | | |||||||| | ||| || || Sbjct 55954 CTTCAGGGTGGAACGTCTTCTTCTCTCCCTGGTACGTGACTTCAATGAGGGGCTTGTCTC 56013 Query 7866 CAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCG 7925 | | ||| | || ||||| | | ||||| ||||| || |||||| | || Sbjct 56014 CCGGACCAGCAATGACCTTGAATGGCCAATGCTTCATGTCCGACTGGACCGAGGGATCAT 56073 Query 7926 AAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTG 7985 |||||| | ||||| || ||||| ||||| |||| ||||||| ||||| || Sbjct 56074 CAAACTTGCGACCGATTAGGCGCTTGGCATCGAAAATGGTGTTTTCCGGGTTGCGTGCGA 56133 Query 7986 TTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACG 8045 |||||||||||| || || |||| ||| | || | | || || ||||||||||| | Sbjct 56134 CTTGGTTCTTCGCAGCATCACCGACAAGTC--TC-TCCGTGTCGGTGAACGCGACGTAGG 56190 Query 8046 ATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGA 8105 | |||||||| | || || ||||||||||| || ||||| || ||||| | ||| | Sbjct 56191 ACGGGGTCGTCCTGTTTCCCTGGTCGTTCGCGATGATTTCCACAGCATCGTTCTTCCACA 56250 Query 8106 CGCCGACGCACGAATACGTTGTTCCTAAATCAATACC 8142 | || ||||| ||||| || || || | |||||||| Sbjct 56251 CACCTACGCAAGAATAGGTGGTGCCAAGGTCAATACC 56287 >seq1087 Length=151058 Score = 96.9 bits (106), Expect = 4e-15 Identities = 147/209 (70%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 ||||| |||||||| | ||||| | ||| || | ||||| |||| | | |||||| Sbjct 107672 CCGATGAGACGCTTCACGTCAAAGAGTGTATTGGTCGGGTTGATGGTCGCCTCGTTCTTT 107613 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || || || ||||| || || | || | || || || ||||| || ||||| | Sbjct 107612 GCGGCCTCACCGATCTTGCGGTCGTCAT---CGGTGAAGGCAACGTAAGAGGGGGTGATA 107556 Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCAC 8116 || || || |||||||||| || || || |||||| | | | | || || |||||| Sbjct 107555 CGGTTACCCTGGTCGTTCGGGATGATGTCAACGCGGCCATGGCGGTACACACCAACGCAC 107496 Query 8117 GAATACGTTGTTCCTAAATCAATACCGAT 8145 || || || ||||| | |||||||||||| Sbjct 107495 GAGTAGGTCGTTCCCAGATCAATACCGAT 107467 Score = 95.1 bits (104), Expect = 2e-14 Identities = 132/183 (72%), Gaps = 8/183 (4%) Strand=Plus/Minus Query 7535 GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG 7594 || |||||||| ||||||||||| || || | | ||| | | || | |||| | Sbjct 108382 GAGACATCAAAAGTACCACCACCAAGATCGTAGACGAGGATGGTCTTCTCGT------TC 108329 Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATAC-GAAGACA 7653 ||||| || ||||||||||| ||||| || || || || || || || |||| || ||| Sbjct 108328 TTCTTGTCCAGACCGTACGCAATAGCAGCAGCGGTCGGCTCGTTGATGATACGGATGAC- 108270 Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713 ||||| ||||||||| | | || || || || || ||||| || | ||||| ||||| Sbjct 108269 GTTCAAGCCAGCAATCGCACCGGCGTCCTTTGTGGCCTGTCGCTGAGCGTCGTTGAAGTA 108210 Query 7714 GGC 7716 || Sbjct 108209 AGC 108207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635087411822280