Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq80 132 4e-25 >seq80 Length=143247 Score = 132 bits (146), Expect = 4e-25 Identities = 363/550 (66%), Gaps = 7/550 (1%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||| | ||||| || | || ||||| ||| ||| || ||||| ||| | || | | Sbjct 56293 GCTGTGGGTATTGACCTTGGCACCACCTATTCTTGCGTAGGTGTGTGGAAGAACGATGCT 56234 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || ||||| || || || || || || ||||| || || || || || || | ||||| Sbjct 56233 GTGGAAATCATCGCGAACGACCAGGGAAACAGGACGACCCCGTCCTACGTCGCGTTCACC 56174 Query 550112 GAAACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || || || | | || || |||||||| || || | |||| | | | || || || Sbjct 56173 GACACGGAGAGACTT-GTCGGTGATGCTGCGAAGAACCAAGTCGCACGCAACCCGGAAAA 56115 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 || ||||| ||||| || || |||| || | | ||| ||||| | | || ||| | Sbjct 56114 CACCATTTTCGATGCCAAGCGCCTAATCGGTCGCAAGTTTGATGATCCCTCGGTCCAGTC 56055 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGA---AAACCTTATATTGA 550287 || |||||||||||||| ||| | | || || | | ||| || || ||||| Sbjct 56054 GGACATGAAGCATTGGCCATTCAAGGTCATTGCTGGTCCGGGAGACAAGCCCCTCATTGA 55995 Query 550288 AGCTACTCATGAAGGATCTGTTAAACAATTTTCA-CCAGAACAAATTTCATCTATGGTTT 550346 || || | | ||| | || | || || || ||| | |||| | ||||||| Sbjct 55994 AGTCACGTACCAGGGA-GAGAAGAAGACGTTCCACCCTGAAGAGGTTTCCGCCATGGTTT 55936 Query 550347 TAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAA 550406 | |||||||| ||| || |||| | || | ||||| | ||| || || | Sbjct 55935 TGGGCAAAATGAAGGAAATCGCGGAGGCTTACCTCGGCAAGGAAGTGAAGGAGGCCGTCA 55876 Query 550407 TAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTA 550466 | || || || || || || || || || || ||||| ||||| || |||||||| | Sbjct 55875 TTACCGTTCCTGCGTACTTCAACGATTCGCAGCGTCAGGCTACCAAGGATGCTGGTACCA 55816 Query 550467 TTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATG 550526 |||| || || | || || || |||||||| || || || || ||||| |||| |||| Sbjct 55815 TTGCCGGCCTCAGCGTCCTCCGCATTATCAACGAGCCCACAGCGGCTGCCATTGCTTATG 55756 Query 550527 GACTTGATAA 550536 | || || || Sbjct 55755 GTCTGGACAA 55746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028993659256330