Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2236 111 2e-19 >seq2236 Length=21742 Score = 111 bits (122), Expect = 2e-19 Identities = 253/373 (68%), Gaps = 6/373 (2%) Strand=Plus/Minus Query 75873 ATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACA 75932 || ||||| || |||||| | | |||| ||||| || || || || ||||| |||| Sbjct 12239 ATCTTTGGTTTGCGATTCTCCAGGCGCAGATCGAGACGGGGACGCCGTACATGCTGTACA 12180 Query 75933 AGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATC 75992 | || || || || |||||| ||||| ||||| |||||||| |||||| || || Sbjct 12179 AAGACGCATGCAATCGGAAGAGCAACCAGAAGAACTTGGGAACGATCAAGTGCAGCAACT 12120 Query 75993 TTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCAT 76052 | ||||| ||| | | || || || || || ||| |||||| ||||| ||||| | Sbjct 12119 TGTGCACAGAAGTCGTCGAATATACGAGCAAAGACGAGGTGGCTGTCTGCAACTTGGCCT 12060 Query 76053 CAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTC 76112 | || | || || |||| || | |||| || ||||| || || ||| | ||| Sbjct 12059 CCGTCTCGCTGCCCAAGTTCGTGGACCGCGAGAGCCGAACTTTCGACTACGAACA-CTTG 12001 Query 76113 ATGA-AATCA-CAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTA 76170 | | |||| ||||| | | || | ||| | ||||| || || || |||| | || Sbjct 12000 AAGCGAATCGTCAAAG-TCATGACGAGAAACTTGAACCGCGTGATCGATCGAAACTACTA 11942 Query 76171 TCCCGTTG-AGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTC 76229 || || ||| ||| ||| || |||| ||| ||||| | |||||||| || | Sbjct 11941 CCCAGTCCCAGAA-GCGAAGAAGAGCAACTTGCGGCACCGACCTGTCGGTTTGGGAGTCC 11883 Query 76230 AAGGTCTCGCGGA 76242 |||||||||| || Sbjct 11882 AAGGTCTCGCAGA 11870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596526967644960