Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq80 367 2e-96 seq1348 188 9e-43 seq1346 179 5e-40 seq1347 176 6e-39 seq687 134 2e-26 seq1087 122 1e-22 >seq80 Length=143247 Score = 367 bits (406), Expect = 2e-96 Identities = 1042/1590 (66%), Gaps = 11/1590 (1%) Strand=Plus/Minus Query 195293 TCTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAAT 195352 |||| ||| | ||||| || | || || || || || || || ||||| ||| | || Sbjct 56299 TCTCCTGCTGTGGGTATTGACCTTGGCACCACCTATTCTTGCGTAGGTGTGTGGAAGAAC 56240 Query 195353 GATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCC 195412 ||| ||| || || ||| |||| ||||| |||||| | || || || || ||||| || Sbjct 56239 GATGCTGTGGAAATCATCGCGAACGACCAGGGAAACAGGACGACCCCGTCCTACGTCGCG 56180 Query 195413 TTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCT 195472 || || || | || | || || || ||||| || || || || || ||||| Sbjct 56179 TTCACCGACACGGAGAGACTTGTCGGTGATGCTGCGAAGAACCAAGTCGCACGCAACCCG 56120 Query 195473 ATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTC 195532 || || | || || || ||||| || || |||||||||||| ||| ||| Sbjct 56119 GAAAACACCATTTTCGATGCCAAGCGCCTAATCGGTCGCAAGTTTGATGATCCCTCGGTC 56060 Query 195533 CAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATG 195592 || || || ||| | ||| | | | || || | ||| || || ||||| | Sbjct 56059 CAGTCGGACATGAAGCATTGGCCATTCAAGGTCATTGCTGGTCCGGGAGACAAGCCCCTC 56000 Query 195593 ATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCC-GAAGAAATTTCGTCTAT 195651 ||| | || | || || |||||||| | || | ||| ||||| |||| | || Sbjct 55999 ATTGAAGTCACGTACCAGGGAGAGAAGAAG-ACGTTCCACCCTGAAGAGGTTTCCGCCAT 55941 Query 195652 GGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGC 195711 ||| ||| || |||||||| | ||||| ||| | | || || ||||| || || Sbjct 55940 GGTTTTGGGCAAAATGAAGGAAATCGCGGAGGCTTACCTCGGCAAGGAAGTGAAGGAGGC 55881 Query 195712 AGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGC 195771 || | || || ||||| ||||||| ||||| || || ||||| || ||||| |||| Sbjct 55880 CGTCATTACCGTTCCTGCGTACTTCAACGATTCGCAGCGTCAGGCTACCAAGGATGCTGG 55821 Query 195772 TGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGC 195831 | | ||||| || || | | || | |||||||| || || ||||||||||| ||||| Sbjct 55820 TACCATTGCCGGCCTCAGCGTCCTCCGCATTATCAACGAGCCCACAGCGGCTGCCATTGC 55761 Query 195832 TTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGG 195891 |||||||||||||||||| || || | || || | ||||| || | ||||| Sbjct 55760 TTATGGTCTGGACAAGAAGGGCTGCGGTGAGATGAACGTCCTCATCTTCGACATGGGTGG 55701 Query 195892 TGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTAC 195951 |||||||| ||||| || || || | || |||| ||||| || ||||| ||||| || Sbjct 55700 CGGTACGTTCGATGTGTCGCTGCTTACAATCGAAGACGGTATCTTTGAAGTCAAGGCCAC 55641 Query 195952 TGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTC 196011 |||||||| || ||||| ||||||||||||||||| ||| || | | | || Sbjct 55640 CGCTGGTGACACCCATCTTGGTGGTGAAGATTTCGACAACCGT-TTGGTGGACTTCTGCG 55582 Query 196012 T-GATGAGTTCCGTCGAAAGAA--TAAGAAAGATATTTCTGGA--AATCCTAGGGCTCTT 196066 | | || ||| || ||||| ||||| | || | | || | || ||| Sbjct 55581 TCCAGGACTTCAAGCGCAAGAACCGCGGAAAG-GACATCAGCACCAACAGCCGTGCCCTT 55523 Query 196067 CGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACA 196126 ||||| || | || || || || |||| ||||||||||| | |||| || Sbjct 55522 CGTCGCCTGCGTACCCAGTGCGAGCGCACCAAGAGAACTCTCTCTAGCAGCACTCAGGCA 55463 Query 196127 ATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCA 196186 | | || ||||| || | ||||| || ||||||| || | |||| | ||||| Sbjct 55462 ACCATCGAAATTGACTCTCTTTTTGAGGGCATTGACTACTCTGTGTCTATCTCTCGTGCG 55403 Query 196187 CGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTA 196246 || ||||| ||| | | || | || | || | || || || || | || Sbjct 55402 CGCTTTGAGGAGCTTTGCATGGACTACTTCCGCAACTCCCTGTTGCCCGTCGAGAAGGTC 55343 Query 196247 CTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCA 196306 || ||| | || || ||| ||| ||| |||| | || || ||||| Sbjct 55342 CTCAAGGACTCTGGTATTGACAAGCGCTCGGTCAGCGAAGTTGTGTTGGTTGGTGGATCT 55283 Query 196307 ACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAAC 196366 |||||||| || |||||||| ||| | | || ||||||||| || || | Sbjct 55282 ACCCGTATCCCCAAGATTCAGCAGCTCATCACTGACTTCTTCAACGGAAAGGAGCCGTGC 55223 Query 196367 AAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTC 196426 | |||||||||| ||||| || ||||| || ||||| || || ||||| || || | Sbjct 55222 AGGTCGATCAACCCCGATGAGGCCGTTGCGTACGGTGCTGCTGTCCAGGCAGCGATCTTG 55163 Query 196427 TCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCC 196486 || ||| || | | || || ||| | || || || |||||||| || | || Sbjct 55162 AAGGGAGTTACCAGCTCTCAGGTGCAGGATTTGCTTCTTCTGGATGTTGCGCCTCTCTCT 55103 Query 196487 CTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATT 196546 || ||||| || ||||| |||||||| ||||| || | ||||| || |||||||| || Sbjct 55102 CTCGGTCTGGAGACAGCTGGTGGTGTCATGACCAAGCTGATTGAAAGAAACACAACGATC 55043 Query 196547 CCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATT 196606 ||||| |||||| || ||| | ||||| | || || || ||||| || | ||| Sbjct 55042 CCGACCAAGAAGTCTCAGACCTTCACCACGTACGCGGACAACCAGCCAGGAGTGCTGATT 54983 Query 196607 CAAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTCGA 196665 || || || ||||| || || | | || | || || ||| | || || || | ||| | Sbjct 54982 CAGGTGTACGAAGGTGAGCG-TGCGATGACCAAAGACAACAACCTCCTGGGCAAATTCCA 54924 Query 196666 TTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATAT 196725 || || || || | || ||| | ||||| || || || | || |||||||| Sbjct 54923 CCTGGATGGTATCCCCCCCGCCCCCCGTGGTGTCCCCCAAATCGAAGTCACTTTCGATAT 54864 Query 196726 AGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAA 196785 ||||| || || || | ||||||||||| | |||||| | | || || | | Sbjct 54863 CGACGCTAACGGTATCATGAACGTCACAGCGCAAGACAAGTCCACCGGAAAGAGCAACCA 54804 Query 196786 GATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCA 196845 || || || || |||||||| || || | | ||||| || || ||||| || Sbjct 54803 AATCACCATCACGAACGACAAGGGCCGCCTCAGTGCGTCCGAAATCGACCGCATGGTGCA 54744 Query 196846 AGATGCGGAAAAGTACAGGGAAGAAGACGA 196875 ||| || || ||||||| | |||||||| Sbjct 54743 AGAGGCAGAGAAGTACAAAGCCGAAGACGA 54714 >seq1348 Length=13918 Score = 188 bits (208), Expect = 9e-43 Identities = 179/229 (78%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| || |||||||| || || ||||| || || |||||| ||||| Sbjct 75 ATGCAGATCTTTGTGAAGACTCTTACTGGGAAGACCATCACGCTTGATGTTGAGCCGTCA 134 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || ||||| ||| | || || ||||| || || |||||||| ||||| || |||||| Sbjct 135 GATACCATCGAGAACGTGAAGGCAAAGATCCAGGACAAGGAAGGTATTCCCCCTGATCAG 194 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || ||||||||||| || ||| | || || || || || || | || |||||| Sbjct 195 CAGCGTCTGATTTTTGCTGGCAAGCAGTTGGAGGACGGCCGAACTCTGTCCGACTACAAC 254 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTG 172090 |||| |||||||| ||||| ||| | ||| | | ||||| ||||||| Sbjct 255 ATTCAGAAGGAGTCGACTCTCCACTTGGTTTTGCGTCTTCGTGGTGGTG 303 >seq1346 Length=13467 Score = 179 bits (198), Expect = 5e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| || ||||| || || || ||||| || || |||||| ||||| Sbjct 13098 ATGCAGATCTTTGTGAAGACTCTTACCGGGAAGACCATCACGCTTGATGTTGAGCCGTCA 13157 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| | || || ||||| || || |||||||| ||||| || |||||| Sbjct 13158 GACACCATCGAGAACGTGAAGGCAAAGATCCAGGACAAGGAAGGTATTCCCCCTGATCAG 13217 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || ||||||||||| || ||| | || || || || || || | || |||||| Sbjct 13218 CAGCGTCTGATTTTTGCTGGCAAGCAGTTGGAGGACGGCCGAACTCTGTCCGACTACAAC 13277 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 |||| |||||||| ||||| ||| | ||| | | ||||| || || Sbjct 13278 ATTCAGAAGGAGTCGACTCTCCACTTGGTTTTGCGTCTTCGCGGAGG 13324 Score = 131 bits (144), Expect = 2e-25 Identities = 113/140 (81%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| || ||||| || || || ||||| || || |||||| ||||| Sbjct 13326 ATGCAGATCTTTGTGAAGACTCTTACCGGGAAGACCATCACGCTTGATGTTGAGCCGTCA 13385 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || ||||| ||| | || || ||||| || || |||||||| ||||| || |||||| Sbjct 13386 GATACCATCGAGAACGTGAAGGCAAAGATCCAGGACAAGGAAGGTATTCCCCCTGATCAG 13445 Query 171982 CAACGACTTATTTTTGCTGG 172001 || || || ||||||||||| Sbjct 13446 CAGCGTCTGATTTTTGCTGG 13465 >seq1347 Length=520 Score = 176 bits (194), Expect = 6e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| || ||||| || || || ||||| || || |||||| ||||| Sbjct 2 ATGCAGATCTTTGTGAAGACTCTTACCGGGAAGACCATCACGCTTGATGTTGAGCCGTCA 61 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || ||||| ||| | || || ||||| || || |||||||| ||||| || |||||| Sbjct 62 GATACCATCGAGAACGTGAAGGCAAAGATCCAGGACAAGGAAGGTATTCCCCCTGATCAG 121 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || ||||||||||| || ||| | || || || || || || | || |||||| Sbjct 122 CAGCGTCTGATTTTTGCTGGCAAGCAGTTGGAGGACGGCCGAACTCTGTCCGACTACAAC 181 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 |||| |||||||| ||||| ||| | ||| | | ||||| || || Sbjct 182 ATTCAGAAGGAGTCGACTCTCCACTTGGTTTTGCGTCTTCGCGGAGG 228 Score = 176 bits (194), Expect = 6e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| || ||||| || || || ||||| || || |||||| ||||| Sbjct 230 ATGCAGATCTTTGTGAAGACTCTTACCGGGAAGACCATCACGCTTGATGTTGAGCCGTCA 289 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || ||||| ||| | || || ||||| || || |||||||| ||||| || |||||| Sbjct 290 GATACCATCGAGAACGTGAAGGCAAAGATCCAGGACAAGGAAGGTATTCCCCCTGATCAG 349 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || ||||||||||| || ||| | || || || || || || | || |||||| Sbjct 350 CAGCGTCTGATTTTTGCTGGCAAGCAGTTGGAGGACGGCCGAACTCTGTCCGACTACAAC 409 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 |||| |||||||| ||||| ||| | ||| | | ||||| || || Sbjct 410 ATTCAGAAGGAGTCGACTCTCCACTTGGTTTTGCGTCTTCGCGGAGG 456 >seq687 Length=105670 Score = 134 bits (148), Expect = 2e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || ||||| || || || || || || ||||| | || || ||| | || Sbjct 92464 ATGCAGATTTTCGTGAAGACGCTCACCGGCAAGACGATCACTTTGGACGTCGAGCCTTCC 92523 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| ||||||||||| |||||||| || ||||| || || ||| Sbjct 92524 GACACCATCGAAAATGTCAAGGCCAAGATTCAGGATAAGGAGGGAATTCCGCCTGACCAG 92583 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || ||||| || || || ||||| || || || | ||||| | || |||||| Sbjct 92584 CAGCGTCTGATTTTCGCAGGCAAGCAGCTCGAGGACGGCAGAACCCTTTCCGACTACAAC 92643 Query 172042 GTTCAAAAGGAGTCTACTCTACAC 172065 | || ||||| || ||||| ||| Sbjct 92644 ATCCAGAAGGAATCCACTCTCCAC 92667 >seq1087 Length=151058 Score = 122 bits (134), Expect = 1e-22 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 195302 ATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTA 195361 || ||||| ||| | ||||| || ||||| || |||||||| | | ||| || || Sbjct 107467 ATCGGTATTGATCTGGGAACGACCTACTCGTGCGTTGGTGTGTACCGCCATGGCCGCGTT 107526 Query 195362 GAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGAT 195421 || || |||||||| ||||| || ||||||| || || || ||||||||||| || ||| Sbjct 107527 GACATCATCCCGAACGACCAGGGTAACCGTATCACCCCCTCTTACGTTGCCTTCACCGAT 107586 Query 195422 AATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACT 195481 | || || | || || |||||||| || || | | || ||||| | |||||| Sbjct 107587 GACGACCGCAAGATCGGTGAGGCCGCAAAGAACGAGGCGACCATCAACCCGACCAATACA 107646 Query 195482 GTCTTTGACGCGAAGCGTCTTATTGGTCGC 195511 ||||||||| ||||||||| || || ||| Sbjct 107647 CTCTTTGACGTGAAGCGTCTCATCGGGCGC 107676 Score = 114 bits (126), Expect = 2e-20 Identities = 141/189 (75%), Gaps = 8/189 (4%) Strand=Plus/Plus Query 195728 GCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTA 195787 |||||||||| || | || |||||||| ||||||||||| | ||| ||||| || | Sbjct 108207 GCTTACTTCAACGACGCTCAGCGACAGGCCACAAAGGACGCCGGTGCGATTGCTGGCTTG 108266 Query 195788 AACTGTC-TTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAA 195846 ||| ||| | | || ||||| || || || || ||||| ||||| || ||||||||||| Sbjct 108267 AAC-GTCATCCGTATCATCAACGAGCCGACCGCTGCTGCTATTGCGTACGGTCTGGACAA 108325 Query 195847 GAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGT 195906 ||| || || ||||| | | | ||| ||||| ||||||||||| |||||||| Sbjct 108326 GAAGAACGA-GAAGACCA-----TCCTCGTCTACGATCTTGGTGGTGGTACTTTTGATGT 108379 Query 195907 CTCACTTCT 195915 ||| |||| Sbjct 108380 CTCCGTTCT 108388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657815387508240