Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1348 95.1 8e-15 seq1347 95.1 8e-15 seq1346 95.1 8e-15 >seq1348 Length=13918 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| ||||| || || | || | || |||| ||||| || || || Sbjct 266 CTCCTTCTGAATGTTGTAGTCGGACAGAGTTCGGCCGTCCTCCAACTGCTTGCCAGCAAA 207 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| || ||||| || | || | || |||||||| | || ||| || ||| Sbjct 206 AATCAGACGCTGCTGATCAGGGGGAATACCTTCCTTGTCCTGGATCTTTGCCTTCACGTT 147 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || | ||| ||||||| || |||||||| || || || ||||| || Sbjct 146 CTCGATGGTATCTGACGGCTCAACATCAAGCGTGATGGTCTTCCCAGTAAGAGTCTTCAC 87 Query 34966 AAAGATCTGCAT 34977 |||||||||||| Sbjct 86 AAAGATCTGCAT 75 >seq1347 Length=520 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| ||||| || || | || | || |||| ||||| || || || Sbjct 193 CTCCTTCTGAATGTTGTAGTCGGACAGAGTTCGGCCGTCCTCCAACTGCTTGCCAGCAAA 134 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| || ||||| || | || | || |||||||| | || ||| || ||| Sbjct 133 AATCAGACGCTGCTGATCAGGGGGAATACCTTCCTTGTCCTGGATCTTTGCCTTCACGTT 74 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || | ||| ||||||| || |||||||| || || || ||||| || Sbjct 73 CTCGATGGTATCTGACGGCTCAACATCAAGCGTGATGGTCTTCCCGGTAAGAGTCTTCAC 14 Query 34966 AAAGATCTGCAT 34977 |||||||||||| Sbjct 13 AAAGATCTGCAT 2 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| ||||| || || | || | || |||| ||||| || || || Sbjct 421 CTCCTTCTGAATGTTGTAGTCGGACAGAGTTCGGCCGTCCTCCAACTGCTTGCCAGCAAA 362 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| || ||||| || | || | || |||||||| | || ||| || ||| Sbjct 361 AATCAGACGCTGCTGATCAGGGGGAATACCTTCCTTGTCCTGGATCTTTGCCTTCACGTT 302 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || | ||| ||||||| || |||||||| || || || ||||| || Sbjct 301 CTCGATGGTATCTGACGGCTCAACATCAAGCGTGATGGTCTTCCCGGTAAGAGTCTTCAC 242 Query 34966 AAAGATCTGCAT 34977 |||||||||||| Sbjct 241 AAAGATCTGCAT 230 >seq1346 Length=13467 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| ||||| || || | || | || |||| ||||| || || || Sbjct 13289 CTCCTTCTGAATGTTGTAGTCGGACAGAGTTCGGCCGTCCTCCAACTGCTTGCCAGCAAA 13230 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| || ||||| || | || | || |||||||| | || ||| || ||| Sbjct 13229 AATCAGACGCTGCTGATCAGGGGGAATACCTTCCTTGTCCTGGATCTTTGCCTTCACGTT 13170 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || | ||| ||||||| || |||||||| || || || ||||| || Sbjct 13169 CTCGATGGTGTCTGACGGCTCAACATCAAGCGTGATGGTCTTCCCGGTAAGAGTCTTCAC 13110 Query 34966 AAAGATCTGCAT 34977 |||||||||||| Sbjct 13109 AAAGATCTGCAT 13098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325670107048823