Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq1347 91.5 1e-13 seq1348 89.7 4e-13 seq1346 89.7 4e-13 >seq1347 Length=520 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||| || ||||| || ||| | || || || ||||| || | || ||| | Sbjct 1 AATGCAGATCTTTGTGAAGACTCTTACCGGGAAGACCATCACGCTTGATGTTGAGCCGTC 60 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||| ||| | || || |||||| || || ||||| | ||| ||||| Sbjct 61 AGATACCATCGAGAACGTGAAGGCAAAGATCCAGGACAAGGAAGGTATTCCCCCTGATCA 120 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||| | || |||| ||| || || ||| ||||||||| | ||| || | |||||||| Sbjct 121 GCAGCGTCTGATTTTTGCTGGCAAGCAGTTGGAGGACGGCCGAACTCTGTCCGACTACAA 180 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 |||||| |||||||| || | ||| |||| ||| | | || || |||| Sbjct 181 CATTCAGAAGGAGTCGACTCTCCACTTGGTTTTGCGTCTTCGCGGAGGAA 230 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||| || ||||| || ||| | || || || ||||| || | || ||| | Sbjct 229 AATGCAGATCTTTGTGAAGACTCTTACCGGGAAGACCATCACGCTTGATGTTGAGCCGTC 288 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||| ||| | || || |||||| || || ||||| | ||| ||||| Sbjct 289 AGATACCATCGAGAACGTGAAGGCAAAGATCCAGGACAAGGAAGGTATTCCCCCTGATCA 348 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||| | || |||| ||| || || ||| ||||||||| | ||| || | |||||||| Sbjct 349 GCAGCGTCTGATTTTTGCTGGCAAGCAGTTGGAGGACGGCCGAACTCTGTCCGACTACAA 408 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 |||||| |||||||| || | ||| |||| ||| | | || || |||| Sbjct 409 CATTCAGAAGGAGTCGACTCTCCACTTGGTTTTGCGTCTTCGCGGAGGAA 458 >seq1348 Length=13918 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||| || ||||| || ||| | || || || ||||| || | || ||| | Sbjct 74 AATGCAGATCTTTGTGAAGACTCTTACTGGGAAGACCATCACGCTTGATGTTGAGCCGTC 133 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||| ||| | || || |||||| || || ||||| | ||| ||||| Sbjct 134 AGATACCATCGAGAACGTGAAGGCAAAGATCCAGGACAAGGAAGGTATTCCCCCTGATCA 193 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||| | || |||| ||| || || ||| ||||||||| | ||| || | |||||||| Sbjct 194 GCAGCGTCTGATTTTTGCTGGCAAGCAGTTGGAGGACGGCCGAACTCTGTCCGACTACAA 253 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768 |||||| |||||||| || | ||| |||| ||| Sbjct 254 CATTCAGAAGGAGTCGACTCTCCACTTGGTTTTG 287 >seq1346 Length=13467 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 |||||||| || ||||| || ||| | || || || ||||| || | || ||| | Sbjct 13095 AAAATGCAGATCTTTGTGAAGACTCTTACCGGGAAGACCATCACGCTTGATGTTGAGCCG 13154 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 || || ||| | || || |||||| || || ||||| | ||| ||| Sbjct 13155 TCAGACACCATCGAGAACGTGAAGGCAAAGATCCAGGACAAGGAAGGTATTCCCCCTGAT 13214 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 |||||| | || |||| ||| || || ||| ||||||||| | ||| || | |||||| Sbjct 13215 CAGCAGCGTCTGATTTTTGCTGGCAAGCAGTTGGAGGACGGCCGAACTCTGTCCGACTAC 13274 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 |||||||| |||||||| || | ||| |||| ||| | | || || |||| Sbjct 13275 AACATTCAGAAGGAGTCGACTCTCCACTTGGTTTTGCGTCTTCGCGGAGGAA 13326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398849007885013