Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq687 149 1e-30 seq940 111 3e-19 >seq687 Length=105670 Score = 149 bits (164), Expect = 1e-30 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 82602 ACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCT 82661 || ||||| ||||| ||||| ||||| || || || || || || |||| ||||| || Sbjct 92672 ACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGGGTTCTGCCGTCCTCG 92613 Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGA 82721 || || || || || || || || | || || || || || ||||| |||||||| ||| Sbjct 92612 AGCTGCTTGCCTGCGAAAATCAGACGCTGCTGGTCAGGCGGAATTCCCTCCTTATCCTGA 92553 Query 82722 ATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTG 82781 ||||| || || |||||||| || || || ||| || || |||||||| ||||||||| Sbjct 92552 ATCTTGGCCTTGACATTTTCGATGGTGTCGGAAGGCTCGACGTCCAAAGTGATCGTCTTG 92493 Query 82782 CCTGTCAACGTCTTTACAAATATCTGCATT 82811 || || | |||||| || || ||||||||| Sbjct 92492 CCGGTGAGCGTCTTCACGAAAATCTGCATT 92463 >seq940 Length=92775 Score = 111 bits (122), Expect = 3e-19 Identities = 199/289 (69%), Gaps = 4/289 (1%) Strand=Plus/Plus Query 198339 CTATGGAATGCATCGCAAATACAGATGATAAGAGAAGGAAAAATGCATAGTTTTTTAAGA 198398 || |||||||| ||||| |||| | || | || || ||||||||| | | | ||| Sbjct 76097 CTGTGGAATGCTGCGCAACTACAACTAGTACGGGACGGGAAAATGCATGGGTACCTGAGA 76156 Query 198399 ATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACACCGGAAGACGCTTTGAGTTAT 198458 ||||||||||| |||||||| || |||||||||| ||||| |||| || |||| | Sbjct 76157 ATGTACTGGGCCAAAAAGATCCTGGAATGGACAAAGTCACCGCAAGAAGCGTTGAAGATT 76216 Query 198459 AGTATCTATCTAAACAATAAGTACGAACTAGACGGCACGGATCCTAACG--GATACGTAG 198516 ||| | | || | |||||| | | || ||||| || || |||| | ||| | Sbjct 76217 GCCATCGCTTTGAATGACAAGTACCACTTGGATGGCACTGACCCCAACGGCGTGACG--G 76274 Query 198517 GTTGTATGTGGTCTATTTGCGGATTACATGATCGAGCGTGGAAAGAAAGACCTATATTTG 198576 | || |||||| ||||||||| | || |||| | | || || | ||| | || | Sbjct 76275 GCTGCATGTGGAGTATTTGCGGTGTCCACGATCAGGGTTTCAAGGAGCGGCCTGTGTTCG 76334 Query 198577 GGAAGATAAGATATATGAATTATGAGGGTTCTAAGAAAAAATTTGATGT 198625 | || || ||||| ||||||||| ||| | || ||||| ||||| Sbjct 76335 GCAAAATCAGATACATGAATTATCCGGGCTGCGAGCGCAAATTCGATGT 76383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981755282078063