Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq940 91.5 3e-13 >seq940 Length=92775 Score = 91.5 bits (100), Expect = 3e-13 Identities = 179/263 (68%), Gaps = 4/263 (2%) Strand=Plus/Plus Query 183022 CTATGGAATGCATCACAAATACAGATGATGAGAGAAGGAAAAATGCATAGTTTTTTACGA 183081 || |||||||| | ||| |||| | | | || || ||||||||| | | | || Sbjct 76097 CTGTGGAATGCTGCGCAACTACAACTAGTACGGGACGGGAAAATGCATGGGTACCTGAGA 76156 Query 183082 ATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACTCCGGAAGATGCTTTGAGTTAT 183141 ||||||||||| |||||||| || |||||||||| | ||| |||| || |||| | Sbjct 76157 ATGTACTGGGCCAAAAAGATCCTGGAATGGACAAAGTCACCGCAAGAAGCGTTGAAGATT 76216 Query 183142 AGTATCTATATGAACAATAAGTACGAACTAGACGGTACGGATCCTAACG--GATACGTAG 183199 ||| | |||| | |||||| | | || || || || || |||| | ||| | Sbjct 76217 GCCATCGCTTTGAATGACAAGTACCACTTGGATGGCACTGACCCCAACGGCGTGACG--G 76274 Query 183200 GTTGTATGTGGTCTATTTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCTATATTTG 183259 | || |||||| ||||||||| | |||||| | | || || | ||| | || | Sbjct 76275 GCTGCATGTGGAGTATTTGCGGTGTCCACGATCAGGGTTTCAAGGAGCGGCCTGTGTTCG 76334 Query 183260 GAAAGATAAGATATATGAATTAT 183282 | || || ||||| ||||||||| Sbjct 76335 GCAAAATCAGATACATGAATTAT 76357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903346639977120