Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq687 116 4e-21 seq1346 111 2e-19 seq1347 105 6e-18 seq1348 102 8e-17 seq2236 87.8 2e-12 >seq687 Length=105670 Score = 116 bits (128), Expect = 4e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 ||||| || ||||| || ||||| ||| | || |||||||||||||||||| Sbjct 92660 GTGGATTCCTTCTGGATGTTGTAGTCGGAAAGGGTTCTGCCGTCCTCGAGCTGCTTGCCT 92601 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| |||| || ||||||||||| || || || || ||||| || ||||| |||| Sbjct 92600 GCGAAAATCAGACGCTGCTGGTCAGGCGGAATTCCCTCCTTATCCTGAATCTTGGCCTTG 92541 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | ||||||| ||||| ||||| | |||| || |||||||| || || Sbjct 92540 ACATTTTCGATGGTGTCGGAAGGCTCGACGTCCAAAGTGATCGTCTTGCCGGTGAGCGTC 92481 Query 133644 TTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 92480 TTCACGAAAATCTGCAT 92464 >seq1346 Length=13467 Score = 111 bits (122), Expect = 2e-19 Identities = 145/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521 || ||||| ||||| || ||||| ||| || || || || ||||| | |||||||| Sbjct 13294 GTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGTTCGGCCG--TCCTCCAACTGCTTGC 13237 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || |||| || |||||||| || || || || ||||||||||| ||||||| || Sbjct 13236 CAGCAAAAATCAGACGCTGCTGATCAGGGGGAATACCTTCCTTGTCCTGGATCTTTGCCT 13177 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||| | ||||| | ||||| || || | |||| ||| || ||||| |||| Sbjct 13176 TCACGTTCTCGATGGTGTCTGACGGCTCAACATCAAGCGTGATGGTCTTCCCGGTAAGAG 13117 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||||||| Sbjct 13116 TCTTCACAAAGATCTGCAT 13098 >seq1347 Length=520 Score = 105 bits (116), Expect = 6e-18 Identities = 144/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521 || ||||| ||||| || ||||| ||| || || || || ||||| | |||||||| Sbjct 198 GTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGTTCGGCCG--TCCTCCAACTGCTTGC 141 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || |||| || |||||||| || || || || ||||||||||| ||||||| || Sbjct 140 CAGCAAAAATCAGACGCTGCTGATCAGGGGGAATACCTTCCTTGTCCTGGATCTTTGCCT 81 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||| | || || | ||||| || || | |||| ||| || ||||| |||| Sbjct 80 TCACGTTCTCGATGGTATCTGACGGCTCAACATCAAGCGTGATGGTCTTCCCGGTAAGAG 21 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||||||| Sbjct 20 TCTTCACAAAGATCTGCAT 2 Score = 105 bits (116), Expect = 6e-18 Identities = 144/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521 || ||||| ||||| || ||||| ||| || || || || ||||| | |||||||| Sbjct 426 GTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGTTCGGCCG--TCCTCCAACTGCTTGC 369 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || |||| || |||||||| || || || || ||||||||||| ||||||| || Sbjct 368 CAGCAAAAATCAGACGCTGCTGATCAGGGGGAATACCTTCCTTGTCCTGGATCTTTGCCT 309 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||| | || || | ||||| || || | |||| ||| || ||||| |||| Sbjct 308 TCACGTTCTCGATGGTATCTGACGGCTCAACATCAAGCGTGATGGTCTTCCCGGTAAGAG 249 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||||||| Sbjct 248 TCTTCACAAAGATCTGCAT 230 >seq1348 Length=13918 Score = 102 bits (112), Expect = 8e-17 Identities = 143/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521 || ||||| ||||| || ||||| ||| || || || || ||||| | |||||||| Sbjct 271 GTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGTTCGGCCG--TCCTCCAACTGCTTGC 214 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || |||| || |||||||| || || || || ||||||||||| ||||||| || Sbjct 213 CAGCAAAAATCAGACGCTGCTGATCAGGGGGAATACCTTCCTTGTCCTGGATCTTTGCCT 154 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||| | || || | ||||| || || | |||| ||| || || || |||| Sbjct 153 TCACGTTCTCGATGGTATCTGACGGCTCAACATCAAGCGTGATGGTCTTCCCAGTAAGAG 94 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||||||| Sbjct 93 TCTTCACAAAGATCTGCAT 75 >seq2236 Length=21742 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 148866 TACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTG 148925 || || |||| || | ||||| |||||||| |||||| |||| |||||| || ||| Sbjct 12098 TATTCGACGACTTCTGTGCACAAGTTGCTGCACTTGATCGTTCCCAAGTTCTTCTGGTTG 12157 Query 148926 CTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGG 148963 ||||| | ||||| ||||| ||||||||||||||||| Sbjct 12158 CTCTTCCGATTGCATGCGTCTTTGTACAGCATGTACGG 12195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483386253541080