Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq687 107 5e-18 seq1346 89.7 1e-12 >seq687 Length=105670 Score = 107 bits (118), Expect = 5e-18 Identities = 137/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || |||||||| || || |||||||||||||| || || ||| ||||| ||||| Sbjct 92479 AAGACGCTCACCGGCAAGACGATCACTTTGGACGTCGAGCCTTCCGACACCATCGAAAAT 92538 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||| || || || |||||| ||| ||| || | || || ||| Sbjct 92539 GTCAAGGCCAAGATTCAGGATAAGGAGGGAATTCCGCCTGACCAGCAGCGTCTGATTTTC 92598 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| | || || || || || | |||| |||||| ||||||| || || Sbjct 92599 GCAGGCAAGCAGCTCGAGGACGGCAGAACCCTTTCCGACTACAACATCCAGAAGGAATCC 92658 Query 206365 ACTCTTCAC 206373 ||||| ||| Sbjct 92659 ACTCTCCAC 92667 >seq1346 Length=13467 Score = 89.7 bits (98), Expect = 1e-12 Identities = 158/230 (69%), Gaps = 3/230 (1%) Strand=Plus/Plus Query 206161 GCTAAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTG 206220 || |||||| ||||| ||| || || || || || || || ||||| | || || Sbjct 13092 GCCAAAATG---CAGATCTTTGTGAAGACTCTTACCGGGAAGACCATCACGCTTGATGTT 13148 Query 206221 GAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTG 206280 || || ||||| |||| || ||| |||||| || || || ||||| ||| Sbjct 13149 GAGCCGTCAGACACCATCGAGAACGTGAAGGCAAAGATCCAGGACAAGGAAGGTATTCCC 13208 Query 206281 CCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCC 206340 || || || | || || || || || ||||||||||| || || | ||| || || Sbjct 13209 CCTGATCAGCAGCGTCTGATTTTTGCTGGCAAGCAGTTGGAGGACGGCCGAACTCTGTCC 13268 Query 206341 GATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 || |||||| | ||||| ||||| ||||| ||| | |||||| | ||||| Sbjct 13269 GACTACAACATTCAGAAGGAGTCGACTCTCCACTTGGTTTTGCGTCTTCG 13318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181734232734357