Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= NC_026242.1 Length=145704 Score E Sequences producing significant alignments: (Bits) Value seq1703 96.9 3e-15 seq2003 91.5 1e-13 seq222 89.7 5e-13 seq1303 87.8 2e-12 >seq1703 Length=160338 Score = 96.9 bits (106), Expect = 3e-15 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 39773 ATCAGGCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTT 39832 |||||||||| |||||||||||| |||| |||||| | ||||||||||| ||||| ||| Sbjct 9478 ATCAGGCGGGCATGGTCTAGTGGCTATGACGTCTGCCTAACACGCAGAAGATCCCGAGTT 9537 Query 39833 CAATCCCCGGTGCCCGTA 39850 | |||| ||||||||||| Sbjct 9538 CGATCCTCGGTGCCCGTA 9555 >seq2003 Length=15148 Score = 91.5 bits (100), Expect = 1e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 39775 CAGGCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCA 39834 || ||||| |||||||||||| |||| |||||| | ||||||||||| ||||| |||| Sbjct 460 CAAGCGGGCATGGTCTAGTGGCTATGACGTCTGCCTAACACGCAGAAGATCCCGAGTTCG 401 Query 39835 ATCCCCGGTGCCCGTATT 39852 |||| ||||||||||||| Sbjct 400 ATCCTCGGTGCCCGTATT 383 >seq222 Length=44069 Score = 89.7 bits (98), Expect = 5e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 39778 GCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATC 39837 ||||| |||||||||||| |||| |||||| | ||||||||||| ||||| |||| ||| Sbjct 37956 GCGGGCATGGTCTAGTGGCTATGACGTCTGCCTAACACGCAGAAGATCCCGAGTTCGATC 38015 Query 39838 CCCGGTGCCCGTAT 39851 | |||||||||||| Sbjct 38016 CTCGGTGCCCGTAT 38029 Score = 89.7 bits (98), Expect = 5e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 39778 GCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATC 39837 ||||| |||||||||||| |||| |||||| | ||||||||||| ||||| |||| ||| Sbjct 38261 GCGGGCATGGTCTAGTGGCTATGACGTCTGCCTAACACGCAGAAGATCCCGAGTTCGATC 38320 Query 39838 CCCGGTGCCCGTAT 39851 | |||||||||||| Sbjct 38321 CTCGGTGCCCGTAT 38334 >seq1303 Length=158713 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 39775 CAGGCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCA 39834 || ||||| |||||||||||| |||| |||||| | ||||||||||| ||||| |||| Sbjct 141038 CAAGCGGGCATGGTCTAGTGGCTATGACGTCTGCCTAACACGCAGAAGATCCCGAGTTCG 141097 Query 39835 ATCCCCGGTGCCCGTA 39850 |||| ||||||||||| Sbjct 141098 ATCCTCGGTGCCCGTA 141113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 466091489556480