Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1184 116 4e-21 >seq1184 Length=60283 Score = 116 bits (128), Expect = 4e-21 Identities = 187/268 (70%), Gaps = 3/268 (1%) Strand=Plus/Minus Query 146882 TGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGT 146941 ||||||| |||| || | || |||||| ||| | | ||| || ||||| || Sbjct 56469 TGGGGAACGGTCTCGGTTCTCTCCGCAGCTGCTCTTTTAAAGCCTCGACATGGTTCGTGT 56410 Query 146942 AGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGG 147001 |||| |||| || ||||| | ||| | || ||| || || ||| | ||||| | Sbjct 56409 AGACATGCGTGTTCCCCATGAAGTGAATGAACTCCTTAGGTTTTAGGTTGCAGACGTGTG 56350 Query 147002 CCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGT 147061 | |||||| || | ||||| ||| || |||||||||||||| || ||||| | | Sbjct 56349 CAACCATGAGCGTCAAAAGCGAATAGGAAGCGATGTTGAAGGGGACGCCGAGGCCGACAT 56290 Query 147062 CCCCCGACCTCTGGTACAGCTGGCACGAGAGCTC---CCCGTCGGCCACGTAAAACTGGC 147118 | | ||||| ||| |||| |||||| ||||| | |||| |||||| ||||||| Sbjct 56289 CGCACGACCGCTGATACATGATGCACGACAGCTCCTTCTGGTCGTTCACGTAGAACTGGC 56230 Query 147119 ACAGGATGTGGCACGGCGGCAGCGCCAT 147146 ||| | ||| || |||||||||||||| Sbjct 56229 ACAACAAGTGACAAGGCGGCAGCGCCAT 56202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583446302488800