Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq2236 89.7 7e-12 >seq2236 Length=21742 Score = 89.7 bits (98), Expect = 7e-12 Identities = 150/216 (69%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 259973 TTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGC 260032 |||||| || ||| | | || |||||||| || || | ||| || ||||| ||| Sbjct 13139 TTTCTGCTGACGATGCAAGAGGACTCGATCGATGGAATTTTCAGCACACTGAAGCAATGC 13080 Query 260033 GCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCG---CACACAAGGTGCGCGCC 260089 ||| | || |||||| | || || ||| ||||| | |||| || ||| | || ||| Sbjct 13079 GCGTTGATTTCCAAGACAGCTGGGGGCCTCGGTCTCGCCGTGACAGACA---TTCGAGCC 13023 Query 260090 GCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGC 260149 | | |||| | || || || ||| | || || |||||| |||| ||||| | Sbjct 13022 ACAAACAGCTACATCCGAGGAACGAATGGCTACTCGAATGGCCTTCTGCCGATGCTCAGA 12963 Query 260150 GTTTTTAACGACACGGCGCGCTACGTCGACCAGTGC 260185 || || |||||| | |||||||||||||||||| || Sbjct 12962 GTCTTCAACGACGCCGCGCGCTACGTCGACCAGGGC 12927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177259784842154