Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq5473 167 2e-36 seq5661 127 2e-24 seq5616 109 6e-19 >seq5473 Length=230 Score = 167 bits (184), Expect = 2e-36 Identities = 115/129 (89%), Gaps = 1/129 (1%) Strand=Plus/Plus Query 8485 TTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCT 8544 |||| |||||| ||||||| | | | |||| | |||||||||||||||| |||||||| Sbjct 102 TTTTTAATTTTTTGTAGAGACAAGATCTCACTTTATTGGCCAGGCTGGTCTTGAACTCCT 161 Query 8545 GACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCA 8604 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 162 GACCTCAGGTCATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCA 221 Query 8605 CC-GCGCCT 8612 || |||||| Sbjct 222 CCTGCGCCT 230 >seq5661 Length=206 Score = 127 bits (140), Expect = 2e-24 Identities = 138/182 (76%), Gaps = 7/182 (4%) Strand=Plus/Minus Query 8442 GAGTAGCTGGGATTACAGGCAAAAGCCACCACGCCAAGCTA-----ATTTTTGTATTTTT 8496 || |||| ||||| ||||| | || ||||||| ||| || ||||| ||||| Sbjct 205 GATTAGCGGGGATGACAGGGAGGCACCCCCACGCCTGGCTTGGCTGATGTTTGTGTTTTT 146 Query 8497 AGTAGAGAGA--GGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGT 8554 ||||| | | || || |||||||| |||||||||||| |||||| |||||| ||| Sbjct 145 AGTAGGCACGCCGTGTCTCTCCATGTTGCTCAGGCTGGTCTCCAACTCCCGACCTCCTGT 86 Query 8555 GATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGG 8614 ||| | || |||||||||| | |||||||||||| || ||| |||||||||| ||| || Sbjct 85 GATGCGCCCACCTCGGCCTCTCGAAGTGCTGGGATGACGGGCGTGAGCCACCGTGCCCGG 26 Query 8615 CC 8616 || Sbjct 25 CC 24 >seq5616 Length=211 Score = 109 bits (120), Expect = 6e-19 Identities = 86/102 (84%), Gaps = 1/102 (1%) Strand=Plus/Minus Query 8515 CCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTC 8574 ||| |||| | |||||||| | |||| |||||||||| ||||||| || |||| ||||| Sbjct 211 CCACGTTGTCAAGGCTGGTTTAGAACCCCTGACCTCAGGTGATCCGCCCACCTCAGCCTC 152 Query 8575 CCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGCC 8616 ||||||||||||||||| | || |||||||| ||||| |||| Sbjct 151 CCAAAGTGCTGGGATTATA-GCGTGAGCCACTGCGCCCGGCC 111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521450733163800