Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1346 131 1e-25 seq1347 125 5e-24 seq1348 120 2e-22 seq687 116 3e-21 >seq1346 Length=13467 Score = 131 bits (144), Expect = 1e-25 Identities = 173/234 (74%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || | || | ||| |||| ||| || || |||||| || |||||||| || Sbjct 13328 CATTCCTCCGCGAAGACGCAAAACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTC 13269 Query 44167 GGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 || ||||| | || |||| |||| |||||| || ||||| |||| |||||||||||| Sbjct 13268 GGACAGAGTTCG-GC-CGTCCTCCAACTGCTTGCCAGCAAAAATCAGACGCTGCTGATCA 13211 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGA 44283 | || | ||||||||| ||| ||||| ||| | | |||| | |||||||| | | Sbjct 13210 GGGGGAATACCTTCCTTGTCCTGGATCTT-TGCCTTCACGTTCTCGATGGTGTCTGACGG 13152 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || | ||| || ||||| || || || |||||||| ||||| ||||| Sbjct 13151 CTCAACATCAAGCGTGATGGTCTTCCCGGTAAGAGTCTTCACAAAGATCTGCAT 13098 >seq1347 Length=520 Score = 125 bits (138), Expect = 5e-24 Identities = 172/234 (74%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || | || | ||| |||| ||| || || |||||| || |||||||| || Sbjct 232 CATTCCTCCGCGAAGACGCAAAACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTC 173 Query 44167 GGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 || ||||| | || |||| |||| |||||| || ||||| |||| |||||||||||| Sbjct 172 GGACAGAGTTCG-GC-CGTCCTCCAACTGCTTGCCAGCAAAAATCAGACGCTGCTGATCA 115 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGA 44283 | || | ||||||||| ||| ||||| ||| | | |||| | ||||| || | | Sbjct 114 GGGGGAATACCTTCCTTGTCCTGGATCTT-TGCCTTCACGTTCTCGATGGTATCTGACGG 56 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || | ||| || ||||| || || || |||||||| ||||| ||||| Sbjct 55 CTCAACATCAAGCGTGATGGTCTTCCCGGTAAGAGTCTTCACAAAGATCTGCAT 2 Score = 125 bits (138), Expect = 5e-24 Identities = 172/234 (74%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || | || | ||| |||| ||| || || |||||| || |||||||| || Sbjct 460 CATTCCTCCGCGAAGACGCAAAACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTC 401 Query 44167 GGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 || ||||| | || |||| |||| |||||| || ||||| |||| |||||||||||| Sbjct 400 GGACAGAGTTCG-GC-CGTCCTCCAACTGCTTGCCAGCAAAAATCAGACGCTGCTGATCA 343 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGA 44283 | || | ||||||||| ||| ||||| ||| | | |||| | ||||| || | | Sbjct 342 GGGGGAATACCTTCCTTGTCCTGGATCTT-TGCCTTCACGTTCTCGATGGTATCTGACGG 284 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || | ||| || ||||| || || || |||||||| ||||| ||||| Sbjct 283 CTCAACATCAAGCGTGATGGTCTTCCCGGTAAGAGTCTTCACAAAGATCTGCAT 230 >seq1348 Length=13918 Score = 120 bits (132), Expect = 2e-22 Identities = 160/216 (74%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCG 44182 ||| |||| ||| || || |||||| || |||||||| |||| ||||| | || || Sbjct 287 CAAAACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGGACAGAGTTCG-GC-CG 230 Query 44183 TCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTT 44242 || |||| |||||| || ||||| |||| |||||||||||| | || | ||||||||| Sbjct 229 TCCTCCAACTGCTTGCCAGCAAAAATCAGACGCTGCTGATCAGGGGGAATACCTTCCTTG 170 Query 44243 TCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAAT 44301 ||| ||||| ||| | | |||| | ||||| || | | || || || | ||| || Sbjct 169 TCCTGGATCTT-TGCCTTCACGTTCTCGATGGTATCTGACGGCTCAACATCAAGCGTGAT 111 Query 44302 CGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| || || || |||||||| ||||| ||||| Sbjct 110 GGTCTTCCCAGTAAGAGTCTTCACAAAGATCTGCAT 75 >seq687 Length=105670 Score = 116 bits (128), Expect = 3e-21 Identities = 154/212 (73%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCT--CGTCG 44185 ||||| ||| || ||| ||||| ||||||||||| |||| || || || |||| Sbjct 92673 CACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAAAG--GGTTCTGCCGTCC 92616 Query 44186 TCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCC 44245 || |||||||| || || || |||| ||||||||| || | || | || ||||| ||| Sbjct 92615 TCGAGCTGCTTGCCTGCGAAAATCAGACGCTGCTGGTCAGGCGGAATTCCCTCCTTATCC 92556 Query 44246 GTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||| | || | |||||||||| | || || |||| || |||||| Sbjct 92555 TGAATCTTGGCCTTGACATTTTCGATGGTGTCGGAAGGCTCGACGTCCAAAGTGATCGTC 92496 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||| ||||||||||| || ||||| Sbjct 92495 TTGCCGGTGAGCGTCTTCACGAAAATCTGCAT 92464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359965317331389