Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq6720 104 5e-17 seq9778 95.1 3e-14 >seq6720 Length=482 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||| Sbjct 346 GCCCGTCTAGCTCAGTCGGTAGAGCGCTTGACTCTTAATCAAGTGGTCGTGGGTTCGAGC 405 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 406 CCCACGGTGGGC 417 >seq9778 Length=479 Score = 95.1 bits (104), Expect = 3e-14 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| ||||||||||||| ||||||| |||||||| | Sbjct 150 GCCCGTCTAGCTCAGT-GGTAGAGCGCTAGACTTTTAATCTAGTGGTCGAGGGTTCGATC 92 Query 165770 CCCACGATGGGC 165781 ||| || ||||| Sbjct 91 CCCTCGGTGGGC 80 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057249093151340