Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq23919 98.7 1e-15 >seq23919 Length=1798 Score = 98.7 bits (108), Expect = 1e-15 Identities = 187/275 (68%), Gaps = 3/275 (1%) Strand=Plus/Minus Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGG 145731 ||||| ||| |||||||| | ||||||| ||||||||| ||||| || ||| ||| Sbjct 1554 AGCTGCTCCTTAAGGGGCTCTATGTGGTTGGAGTAGACGTGGGCGTCACCTAGGCAGTGC 1495 Query 145732 ATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAG 145791 | ||| || || | | ||| | | || || | |||| | ||||||| || ||| Sbjct 1494 ACGAACTCACCACGTTTCAGGTCGCATACTTGTGCAAGCATGCATGTCAGCAAGGCATAG 1435 Query 145792 CTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851 || || |||||||| || || || || |||||||| | || | | |||| |||||| Sbjct 1434 CTAGCAATGTTGAAAGGAACACCAAGTCCCATGTCGCAGGACCTTTAATACATTTGGCAG 1375 Query 145852 GAGAG---CTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCC 145908 ||||| || | | | ||||||||||| | || |||||||| || || ||| Sbjct 1374 GAGAGAGCCTTATCTGCAGAGACGTAGAACTGTGCTAAGATATGGCAGGGAGGGAGCGCC 1315 Query 145909 ATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAG 145943 || | ||||| ||| ||||| || || || Sbjct 1314 ATCTTGCTGAGGTCAGCCACATTCCACGCAGTCAG 1280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589763926528720