Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq23919 93.3 3e-14 >seq23919 Length=1798 Score = 93.3 bits (102), Expect = 3e-14 Identities = 157/227 (69%), Gaps = 3/227 (1%) Strand=Plus/Plus Query 20401 ATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGT---TGCTAATAATGAATTG 20457 ||||| | ||||| || ||||| || || || ||||| ||| |||| | | Sbjct 1313 ATGGCGCTCCCTCCCTGCCATATCTTAGCACAGTTCTACGTCTCTGCAGATAAGGCTCTC 1372 Query 20458 TCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCA 20517 || || ||||||||| || | ||| || |||||||| |||||||||||||| ||||| Sbjct 1373 TCCTGCCAAATGTATTAAAGGTCCTGCGACATGGGACTTGGTGTTCCTTTCAACATTGCT 1432 Query 20518 AGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGACTTA 20577 || ||||| |||| || | ||| ||||||| || || | ||| ||||| || Sbjct 1433 AGCTATGCCTTGCTGACATGCATGCTTGCACAAGTATGCGACCTGAAACGTGGTGAGTTC 1492 Query 20578 GTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACC 20624 || ||| | |||| ||||| || | ||| || || ||||| || Sbjct 1493 GTGCACTGCCTAGGTGACGCCCACGTCTACTCCAACCACATAGAGCC 1539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398977634097010