Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq23919 96.9 3e-15 >seq23919 Length=1798 Score = 96.9 bits (106), Expect = 3e-15 Identities = 176/257 (68%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 20925 AGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCC 20984 ||||| || | ||||||| ||| |||||||||||||| | | |||||| || || || Sbjct 1542 AGGGGCTCTATGTGGTTGGAGTAGACGTGGGCGTCACCTAGGCAGTGCACGAACTCACCA 1483 Query 20985 GGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTA 21044 | ||||| | || || || | || | ||||| | ||| ||||| || ||||| Sbjct 1482 CGTTTCAGGTCGCATACTTGTGCAAGCATGCATGTCAGCAAGGCATAGCTAGCAATGTTG 1423 Query 21045 AACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAG---CTCC 21101 || || || || || ||||||||| |||||| | |||| |||||||| || || Sbjct 1422 AAAGGAACACCAAGTCCCATGTCGCAGGACCTTTAATACATTTGGCAGGAGAGAGCCTTA 1363 Query 21102 CCCCGAGCCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGG 21161 | || ||||| ||||| || | || || |||||||| |||||| |||| Sbjct 1362 TCTGCAGAGACGTAGAACTGTGCTAAGATATGGCAGGGAGGGAGCGCCATCTTGCTGAGG 1303 Query 21162 TCCGCGGGGTTCCACGC 21178 || || |||||||| Sbjct 1302 TCAGCCACATTCCACGC 1286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427554852908640