Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq25860 86.0 5e-12 >seq25860 Length=1350 Score = 86.0 bits (94), Expect = 5e-12 Identities = 119/164 (73%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 13133 AGATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGC 13192 || |||||| | | || || ||||| | ||||| ||||| ||||| || || || Sbjct 979 AGGTGCTTATAGAGCAAGCAAGCAAATTGTGTGTGCATGCCTTCGTCTCTGCTGATAAGT 920 Query 13193 TCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCA 13252 || || || || || || || ||||||||||| | || || | ||| || || | |||| Sbjct 919 TCATTCGAGAAGGTGAGTCCAGGCATAAGCCCCCTCTTCTTGAGCCAGAAGATCG-AGCA 861 Query 13253 -AACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTA 13295 || |||||||| || |||||||| ||||| |||||||||| Sbjct 860 GAAGCTGCCCGAAAAGAAGATTCCTTCTACTGCCGCAAACGCTA 817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430759595298036