Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq3222 104 2e-17 >seq3222 Length=1589 Score = 104 bits (114), Expect = 2e-17 Identities = 202/295 (68%), Gaps = 5/295 (2%) Strand=Plus/Minus Query 145862 TAGAGCTCCTCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACAC 145921 || |||| ||||||| ||| | |||| | ||||| ||||||| || || ||| Sbjct 1327 TACAGCTTCTCAAACTACTCACCCCATGAATCATAGAGGCCAGGACACTCATTTGGGCAC 1268 Query 145922 ATCAGCGACCATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGC 145981 || || | ||| |||| | | | | || | || ||| || | |||||||||||||| Sbjct 1267 ATAAGAGTCCAATCGCCATCGACCTCCACCCTCTTCATGAAAAGATCTGGCACCCACAAA 1208 Query 145982 GCGTACATCAAGTCGCGCGCTTTGCAATCCTCAGCACCCATGTTTC-GCTTCAAATTAAG 146040 || || | ||| || | ||| || || || ||| || ||| |||||| | ||| Sbjct 1207 GCATAGAACAAATCTCTCGC-ACGCTATTCTTCCTTCCCGTGGTTCTTCTTCAACTGAAG 1149 Query 146041 CACACTATAGATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTT 146100 | ||||||||| |||||||| || |||| |||||||||| || || |||| ||| Sbjct 1148 GAAGTCATAGATGTCGGCGTGCCAGGGCTCAAGGTAGACGGCGAAGGAACCCTTTCTTTT 1089 Query 146101 G---CCACCCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGC 146152 | ||||| ||||| |||| | | | | ||| |||| |||| ||||||| Sbjct 1088 GCCACCACCTTGGTCAACGTATCTTGATGTATCGTTGTAGACTCGCAACATGGGC 1034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471762527013120