Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq36835 105 5e-18 seq16860 105 5e-18 seq22711 102 7e-17 seq25823 96.9 3e-15 seq4283 96.9 3e-15 seq39418 95.1 1e-14 seq39092 95.1 1e-14 seq8188 95.1 1e-14 seq26408 93.3 3e-14 seq20653 87.8 1e-12 seq15986 84.2 2e-11 >seq36835 Length=903 Score = 105 bits (116), Expect = 5e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| |||||||| |||| ||| || || || |||||||| ||||||||||| | | Sbjct 659 CCACCTCTCAGCCTCAGCACCAAATGGAGGGTTGATTCCTTTTGGATGTTGTAGTCAGAC 600 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| || | ||||| | || || || ||| | || || | |||||| || || Sbjct 599 AAGGTTCTGCCATCCTCAAGCTGCTTTCCAGCAAAGATGAGTCTCTGTTGATCGGGGGGA 540 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| || ||||| ||| || | | | ||||||| ||||| Sbjct 539 ATACCCTCCTTGTCCTGGATCTTTGC--CTTGACGTTCTCAATAGTGTCGGAAGGCTCAA 482 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||||| ||||| ||||| || ||||| || || ||||| Sbjct 481 CATCGAGAGTGATGGTCTTTCCAGTCAGGGTCTTGACGAAGATTTGCAT 433 >seq16860 Length=798 Score = 105 bits (116), Expect = 5e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| |||||||| |||| ||| || || || |||||||| ||||||||||| | | Sbjct 659 CCACCTCTCAGCCTCAGCACCAAATGGAGGGTTGATTCCTTTTGGATGTTGTAGTCAGAC 600 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| || | ||||| | || || || ||| | || || | |||||| || || Sbjct 599 AAGGTTCTGCCATCCTCAAGCTGCTTTCCAGCAAAGATGAGTCTCTGTTGATCGGGGGGA 540 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| || ||||| ||| || | | | ||||||| ||||| Sbjct 539 ATACCCTCCTTGTCCTGGATCTTTGC--CTTGACGTTCTCAATAGTGTCGGAAGGCTCAA 482 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||||| ||||| ||||| || ||||| || || ||||| Sbjct 481 CATCGAGAGTGATGGTCTTTCCAGTCAGGGTCTTGACGAAGATTTGCAT 433 >seq22711 Length=903 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| |||||||| |||| ||| || || || |||||||| ||||||||||| | | Sbjct 659 CCACCTCTCAGCCTCAGCACCAAATGGAGGGTTGATTCCTTTTGGATGTTGTAGTCAGAC 600 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || |||| || | || || || ||| | || || | |||||| || || Sbjct 599 AAGGTCCTGCCGTCTTCAAGCTGCTTTCCTGCAAAGATGAGTCTCTGTTGATCGGGGGGA 540 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| || ||||| ||| || | | | ||||||| ||||| Sbjct 539 ATACCCTCCTTGTCCTGGATCTTTGC--CTTGACGTTCTCAATAGTGTCGGAAGGCTCAA 482 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||||| ||||| ||||| || ||||| || || ||||| Sbjct 481 CATCGAGAGTGATGGTCTTTCCAGTCAGGGTCTTGACGAAGATTTGCAT 433 >seq25823 Length=903 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| |||||||| |||| ||| || || || |||||||| ||||||||||| | | Sbjct 659 CCACCTCTCAGCCTCAGCACCAAATGGAGGGTTGATTCCTTTTGGATGTTGTAGTCAGAC 600 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || |||| || | || || || ||| | || || | |||||| || || Sbjct 599 AAGGTCCTGCCGTCTTCAAGCTGCTTTCCTGCAAAGATGAGTCTCTGTTGATCGGGGGGA 540 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| || ||||| ||| || | | | |||||| ||||| Sbjct 539 ATACCCTCCTTGTCCTGGATCTTTGC--CTTGACGTTTTCAATGGTGTCGGAAGGCTCAA 482 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||||| ||||| ||||| || ||||| || || ||||| Sbjct 481 CATCGAGAGTGATGGTCTTTCCAGTCAGGGTCTTGACGAAGATTTGCAT 433 >seq4283 Length=919 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| |||||||| |||| ||| || || || |||||||| ||||||||||| | | Sbjct 261 CCACCTCTCAGCCTCAGCACCAAATGGAGGGTTGATTCCTTTTGGATGTTGTAGTCAGAC 320 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || |||| || | || || || ||| | || || | |||||| || || Sbjct 321 AAGGTCCTGCCGTCTTCAAGCTGCTTTCCTGCAAAGATGAGTCTCTGTTGATCGGGGGGA 380 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| || ||||| ||| || | | | |||||| ||||| Sbjct 381 ATACCCTCCTTGTCCTGGATCTTTGC--CTTGACGTTTTCAATGGTGTCGGAAGGCTCAA 438 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||||| ||||| ||||| || ||||| || || ||||| Sbjct 439 CATCGAGAGTGATGGTCTTTCCAGTCAGGGTCTTGACGAAGATTTGCAT 487 >seq39418 Length=937 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| || |||| || | ||| || ||||||||||| || ||||| ||||||| Sbjct 523 CCACCTCTCAGTCTCAAGACGAGATGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGAG 582 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| || |||| ||||| | |||||| || | || || | |||||| || || Sbjct 583 AGGGTTCTGCCGTCTTCCAACTATTTGCCGGCGAAGATGAGTCTCTGTTGATCGGGTGGG 642 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || |||||||| || || || |||||| | | | ||||| ||||| Sbjct 643 ATTCCTTCTTTGTCCTGGATCTTAGC--CTTCACGTTCTCGATGGTGTCTGATGGCTCGA 700 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| |||||| || ||||| || || || || ||||| || |||||| Sbjct 701 CGTCCAAGGTGATAGTCTTTCCTGTGAGAGTCTTCACAAAGATTTGCATT 750 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| ||||| || || | ||| || || |||||||| || ||||||||||||| Sbjct 295 CCACCTCTAAGCCTGAGCACGAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGAA 354 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||| | ||| ||||| || | || || | || |||||| ||| Sbjct 355 AGGGTCCTTCCGTCCTCGAGTTGCTTGCCAGCGAAGATGAGTCTCTATTGGTCGGGAGGG 414 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||| || ||||| || | ||| || | | | ||||| ||||| Sbjct 415 ATGCCTTCCTTGTCCTAGATCTTGGCCTTAACATTCTCAATGGTGTCTGATGGCTCAACA 474 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || | ||||||||| || ||||| || || || || || ||||||||| Sbjct 475 TCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATT 522 >seq39092 Length=483 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| || |||| || | ||| || ||||||||||| || ||||| ||||||| Sbjct 69 CCACCTCTCAGTCTCAAGACGAGATGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGAG 128 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| || |||| ||||| | |||||| || | || || | |||||| || || Sbjct 129 AGGGTTCTGCCGTCTTCCAACTATTTGCCGGCGAAGATGAGTCTCTGTTGATCGGGTGGG 188 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || |||||||| || || || |||||| | | | ||||| ||||| Sbjct 189 ATTCCTTCTTTGTCCTGGATCTTAGC--CTTCACGTTCTCGATGGTGTCTGATGGCTCGA 246 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| |||||| || ||||| || || || || ||||| || |||||| Sbjct 247 CGTCCAAGGTGATAGTCTTTCCTGTGAGAGTCTTCACAAAGATTTGCATT 296 >seq8188 Length=937 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| || |||| || | ||| || ||||||||||| || ||||| ||||||| Sbjct 415 CCACCTCTCAGTCTCAAGACGAGATGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGAA 356 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| || |||| ||||| | |||||| || | || || | |||||| || || Sbjct 355 AGGGTTCTGCCGTCTTCCAACTATTTGCCGGCGAAGATGAGTCTCTGTTGATCGGGTGGG 296 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || |||||||| || || || |||||| | | | ||||| ||||| Sbjct 295 ATTCCTTCTTTGTCCTGGATCTTAGC--CTTCACGTTCTCGATGGTGTCAGATGGCTCGA 238 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| |||||| || ||||| || || || || ||||| || |||||| Sbjct 237 CGTCCAAGGTGATAGTCTTTCCTGTGAGAGTCTTCACAAAGATTTGCATT 188 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| ||||| || || | ||| || || |||||||| || ||||||||||||| Sbjct 643 CCACCTCTAAGCCTGAGCACGAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGAA 584 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||| | ||| ||||| || | || || | || |||||| ||| Sbjct 583 AGGGTCCTTCCGTCCTCGAGTTGCTTGCCAGCGAAGATGAGTCTCTATTGGTCGGGAGGG 524 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||| || ||||| || | ||| || | | | ||||| ||||| Sbjct 523 ATGCCTTCCTTGTCCTAGATCTTGGCCTTAACATTCTCAATGGTGTCTGATGGCTCAACA 464 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || | ||||||||| || ||||| || || || || || ||||||||| Sbjct 463 TCAAGGGTGATGGTCTTGCCGGTAAGGGTCTTCACGAAGATCTGCATT 416 >seq26408 Length=477 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| |||||||| |||| ||| || || || |||||||| ||||||||||| | | Sbjct 217 CCACCTCTCAGCCTCAGCACCAAATGGAGGGTTGATTCCTTTTGGATGTTGTAGTCAGAC 158 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| || | ||||| | || || || ||| | || || | |||||| || || Sbjct 157 AAGGTTCTGCCATCCTCAAGCTGCTTTCCAGCAAAGATGAGTCTCTGTTGATCGGGGGGA 98 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| || ||||| ||| || | | | |||||| ||||| Sbjct 97 ATACCCTCCTTGTCCTGGATCTTTGC--CTTGACGTTTTCAATGGTGTCGGAAGGCTCAA 40 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGAC 16923 || | |||||||| ||||| ||||| || ||||| Sbjct 39 CATCGAGAGTGATGGTCTTTCCAGTCAGGGTCTTGAC 3 >seq20653 Length=689 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| ||||| || || | ||| || || |||||||| || ||||||||||||| Sbjct 395 CCACCTCTAAGCCTGAGCACGAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGAA 336 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||| | ||| ||||| || | || || | || |||||| ||| Sbjct 335 AGGGTCCTTCCGTCCTCGAGTTGCTTGCCAGCGAAGATGAGTCTCTATTGGTCGGGAGGG 276 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||| || ||||| || | ||| || | | | ||||| ||||| Sbjct 275 ATGCCTTCCTTGTCCTAGATCTTGGCCTTAACATTCTCAATGGTGTCTGATGGCTCAACA 216 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || | ||||||||| || ||||| || || || || || ||||||||| Sbjct 215 TCAAGGGTGATGGTCTTGCCGGTAAGGGTCTTCACGAAGATCTGCATT 168 >seq15986 Length=339 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| |||||||| |||| ||| || || || |||||||| ||||||||||| | | Sbjct 120 CCACCTCTCAGCCTCAGCACCAAATGGAGGGTTGATTCCTTTTGGATGTTGTAGTCAGAC 179 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| || | ||||| | || || || ||| | || || | || |||||| ||| Sbjct 180 AAGGTTCTGCCATCCTCAAGCTGCTTTCCAGCAAAGATGAGTCTCTATTGGTCGGGAGGG 239 Query 16829 ACGCCCTCTTTGTC 16842 | ||| || ||||| Sbjct 240 ATGCCTTCCTTGTC 253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404878581909820