Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= NC_008717.1 Length=36415 Score E Sequences producing significant alignments: (Bits) Value seq36599 91.5 3e-14 >seq36599 Length=799 Score = 91.5 bits (100), Expect = 3e-14 Identities = 217/323 (67%), Gaps = 14/323 (4%) Strand=Plus/Minus Query 20251 TCCGTCCACCACCGCCAGCAACACCTATGGCTGGCTGGGGCAGTTCCCCAAGCTGCGCGA 20310 |||||||| |||| | | ||||| | |||||| || || ||||| ||||||| Sbjct 600 TCCGTCCAGCACCCGTGACCAGACCTACGCCTGGCTCGGCCAAATCCCCCGCATGCGCGA 541 Query 20311 GTGGATCGGTCA---GCGTGTCATCAAGGACATGGCGGCCCAGGGCTACCAGATCACCAA 20367 |||| | || | ||| |||||| | | | | ||| |||||| ||||||||| Sbjct 540 GTGGCTTGGCGAAAAGCGG---ATCAAGAGCCTTGAAGTCCACGGCTACACGATCACCAA 484 Query 20368 -CAAGCTCTTCGAATCGAC---CGTGGGCGTAAAACGTACCGACATCGAGGACGACAACC 20423 | || |||||| || || || | || || ||||||||||||||| | Sbjct 483 TCGAGAA-TTCGAACTCACTATCGAGGTCCCCAAG---ACTGACATCGAGGACGACCAGT 428 Query 20424 TCGGCGTCTACGGACCGCTCATGCAGGAAATGGGGCGCGCTGCCGGCGCGCATCCCGACG 20483 ||||||||| || ||| | | |||| ||||| ||| ||| || | || || | Sbjct 427 ACGGCGTCTATGGCCCGATGTTCGAGGAGATGGGACGCAGCGCCAACGAGTTCCCTGATG 368 Query 20484 AGCTGGTCTTCGCCCTGCTCAAGGCCGGCAACGCCAATCTCTGCTACGACGGTCAAAACT 20543 | || || ||| ||| ||||||| ||| | |||| | || | ||||| || |||| Sbjct 367 AACTCGTTTTCAGCCTCCTCAAGGAGGGCTTCTCCAAGCCGTGTTTTGACGGGCAGAACT 308 Query 20544 TCTTCGACACCGATCACCCGGTC 20566 |||||||||| || || |||||| Sbjct 307 TCTTCGACACTGAGCATCCGGTC 285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116347764495732