Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3222 118 1e-21 seq25860 91.5 2e-13 >seq3222 Length=1589 Score = 118 bits (130), Expect = 1e-21 Identities = 500/783 (64%), Gaps = 15/783 (2%) Strand=Plus/Minus Query 114452 TTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCA 114511 ||||| ||| |||||||| || || || || || || |||| | ||||| | Sbjct 1582 TTGACGAACTGGGGAAGGGCAATGGAGGCGAGGTTGCAGACAGCGACTTCATCGGCAGAG 1523 Query 114512 GTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 114571 |||||||| || || || || |||| |||||| |||||| ||||| ||||| | | | Sbjct 1522 GTGTACTCGATGATCTCAGTGCACAGGTTTGAAGACTTAATAGTGCCTAAGTTTTGCT-A 1464 Query 114572 TTTGACTTTGTG-TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTG 114630 ||| |||| | ||||||||||| ||||| ||||||||||| || || || || | || Sbjct 1463 GTTGCTTTTGCGGTTACACGCATCTTTGTAGAGCATGTATGGGGTGCCTGTTTCGATCTG 1404 Query 114631 GGACTTGAGAAT--AGCCTTCCAGACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCC 114688 || | || | || ||||| | ||| | || || ||| | Sbjct 1403 ACTCTCAATGATCCATCC--CCAGAGTTACCTAGCTTTTATTGTCTTTCTGCCTCTCTTA 1346 Query 114689 TCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCT 114748 |||| ||| |||| || || ||||||| |||||| | || |||| || Sbjct 1345 TCCTTCTCATACTGCTCATACAGCTTCTCAAACTACTCACCCCATGAATCATAGAGGCCA 1286 Query 114749 GGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAG 114808 || || || |||||| | |||| ||| | ||| | |||| || | ||||||||| Sbjct 1285 GGACACTCATTTGGGCACATAAGAGTCCAATCGCCATCGACCTCCACCCTCTTCATGAAA 1226 Query 114809 AGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGA 114868 || ||||| | ||| | ||| |||| | ||| | || |||||| | ||| || Sbjct 1225 AGATCTGGCACCCACAAAGCATAGAACAAATCTCTCGCACGCTATTCTTCCTTCCCGTGG 1166 Query 114869 TTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCG 114928 || ||||| | ||||| ||| || |||||||| || || ||||| || ||| Sbjct 1165 TTCTTCTTCAACTGAAGGAAGTCATAGATGTCGGCGTGCCAGGGCTCAAGGTAGACGGCG 1106 Query 114929 ATTGACCCCTTAC---GACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACG 114985 | || ||||| | | |||| | |||| || || || | ||| | || | || Sbjct 1105 AAGGAACCCTTTCTTTTGCCACCACCTTGGTCAACGTATCTTGATGTATCGTTGTAGACT 1046 Query 114986 CGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTG 115045 || | ||| || | | || | ||| | |||||||| || |||||| | | | Sbjct 1045 CGCAACATGGGCACTAACCCGTTAGAGTATCCATTTGTTCCACGAATATAACTATCAGAC 986 Query 115046 GCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCAC 115105 ||||||| || ||| || |||||||| ||||| ||| || || | || Sbjct 985 GCTCTGATTCTGTGCATGGCTATCCCAATACCTCCTGCATGCTTCGAAATGATGGAACAT 926 Query 115106 TCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGC-- 115163 | | | || | | |||| || || || || ||| |||| | | | ||||| | Sbjct 925 TGCTTCAGCGTCTCAAAGATTCCTTCAATTGAATCATCCTTCATGTCCAGCAGGAAACAC 866 Query 115164 -AGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATG 115222 |||| ||| || || | ||||| ||||| ||||| || || ||||| || || || Sbjct 865 GAGCT---CATCTGAGGATTCGGTGTTCCAGCATTGAACAGAGTAGGTGTAGCATGTGTG 809 Query 115223 AAC 115225 ||| Sbjct 808 AAC 806 >seq25860 Length=1350 Score = 91.5 bits (100), Expect = 2e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| | | ||| | || ||||| | | ||| ||||||||||||||| ||||| Sbjct 958 GCAAATTGTGTGTGCATGCCTTCGTCTCTGCTGATAAGTTCATTCGAGAAGGTGAGTCCA 899 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 ||||| || |||| |||||| | |||||| |||| || || ||||| ||||||||| Sbjct 898 GGCATAAGCCCCCTCTTCTTGAGCCAGAAGATCGAGCAGAAGCTGCCCGAAAAGAAGATT 839 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGC 126201 || || || ||| ||||| | ||| | ||| || Sbjct 838 CCTTCTACTGCCGCAAACGCTACGAGTCTCTCTGC 804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597036868187440