Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq39418 120 1e-21 seq36835 120 1e-21 seq27931 120 1e-21 seq25823 120 1e-21 seq22711 120 1e-21 seq20653 120 1e-21 seq16860 120 1e-21 seq10818 120 1e-21 seq8188 120 1e-21 seq4283 120 1e-21 seq13023 114 5e-20 seq33948 109 2e-18 seq29885 104 9e-17 seq15986 91.5 6e-13 >seq39418 Length=937 Score = 120 bits (132), Expect = 1e-21 Identities = 162/226 (72%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || || || |||||||| || || || ||| | ||||| || |||| Sbjct 294 AATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACTTTGGATGTGGAGCCATC 235 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | |||||| | || || ||||||||||||||||| || ||||| ||||| Sbjct 234 TGACACGATTGAAAACGTGAAGGCCAAGATTCAAGATAAGGAAGGTATCCCTCCCGATCA 175 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | | |||||| | || || || |||||||| || || || | | || || || Sbjct 174 ACAGAGACTGATTTTCGCTGGAAAGCAGCTTGAAGACGGCAGGACCCTCTCTGACTACAA 115 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 |||| | ||||| | || || || || || | |||||||||||| Sbjct 114 TATTCAGAAGGAATCCACCCTGCATTTGGTGCTCAGACTGAGAGGA 69 >seq36835 Length=903 Score = 120 bits (132), Expect = 1e-21 Identities = 162/226 (72%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || || || |||||||| || || || ||| | ||||| || |||| Sbjct 204 AATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACTTTGGATGTGGAGCCATC 263 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | |||||| | || || ||||||||||||||||| || ||||| ||||| Sbjct 264 TGACACGATTGAAAACGTGAAGGCCAAGATTCAAGATAAGGAAGGTATCCCTCCCGATCA 323 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | | |||||| | || || || |||||||| || || || | | || || || Sbjct 324 ACAGAGACTGATTTTCGCTGGAAAGCAGCTTGAAGACGGCAGGACCCTCTCTGACTACAA 383 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 |||| | ||||| | || || || || || | |||||||||||| Sbjct 384 TATTCAGAAGGAATCCACCCTGCATTTGGTGCTCAGACTGAGAGGA 429 >seq27931 Length=569 Score = 120 bits (132), Expect = 1e-21 Identities = 162/226 (72%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || || || |||||||| || || || ||| | ||||| || |||| Sbjct 204 AATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACTTTGGATGTGGAGCCATC 263 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | |||||| | || || ||||||||||||||||| || ||||| ||||| Sbjct 264 TGACACGATTGAAAACGTGAAGGCCAAGATTCAAGATAAGGAAGGTATCCCTCCCGATCA 323 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | | |||||| | || || || |||||||| || || || | | || || || Sbjct 324 ACAGAGACTGATTTTCGCTGGAAAGCAGCTTGAAGACGGCAGGACCCTCTCTGACTACAA 383 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 |||| | ||||| | || || || || || | |||||||||||| Sbjct 384 TATTCAGAAGGAATCCACCCTGCATTTGGTGCTCAGACTGAGAGGA 429 >seq25823 Length=903 Score = 120 bits (132), Expect = 1e-21 Identities = 162/226 (72%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || || || |||||||| || || || ||| | ||||| || |||| Sbjct 204 AATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACTTTGGATGTGGAGCCATC 263 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | |||||| | || || ||||||||||||||||| || ||||| ||||| Sbjct 264 TGACACGATTGAAAACGTGAAGGCCAAGATTCAAGATAAGGAAGGTATCCCTCCCGATCA 323 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | | |||||| | || || || |||||||| || || || | | || || || Sbjct 324 ACAGAGACTGATTTTCGCTGGAAAGCAGCTTGAAGACGGCAGGACCCTCTCTGACTACAA 383 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 |||| | ||||| | || || || || || | |||||||||||| Sbjct 384 TATTCAGAAGGAATCCACCCTGCATTTGGTGCTCAGACTGAGAGGA 429 >seq22711 Length=903 Score = 120 bits (132), Expect = 1e-21 Identities = 162/226 (72%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || || || |||||||| || || || ||| | ||||| || |||| Sbjct 204 AATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACTTTGGATGTGGAGCCATC 263 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | |||||| | || || ||||||||||||||||| || ||||| ||||| Sbjct 264 TGACACGATTGAAAACGTGAAGGCCAAGATTCAAGATAAGGAAGGTATCCCTCCCGATCA 323 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | | |||||| | || || || |||||||| || || || | | || || || Sbjct 324 ACAGAGACTGATTTTCGCTGGAAAGCAGCTTGAAGACGGCAGGACCCTCTCTGACTACAA 383 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 |||| | ||||| | || || || || || | |||||||||||| Sbjct 384 TATTCAGAAGGAATCCACCCTGCATTTGGTGCTCAGACTGAGAGGA 429 >seq20653 Length=689 Score = 120 bits (132), Expect = 1e-21 Identities = 162/226 (72%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || || || |||||||| || || || ||| | ||||| || |||| Sbjct 396 AATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACTTTGGATGTGGAGCCATC 455 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | |||||| | || || ||||||||||||||||| || ||||| ||||| Sbjct 456 TGACACGATTGAAAACGTGAAGGCCAAGATTCAAGATAAGGAAGGTATCCCTCCCGATCA 515 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | | |||||| | || || || |||||||| || || || | | || || || Sbjct 516 ACAGAGACTGATTTTCGCTGGAAAGCAGCTTGAAGACGGCAGGACCCTCTCTGACTACAA 575 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 |||| | ||||| | || || || || || | |||||||||||| Sbjct 576 TATTCAGAAGGAATCCACCCTGCATTTGGTGCTCAGACTGAGAGGA 621 >seq16860 Length=798 Score = 120 bits (132), Expect = 1e-21 Identities = 162/226 (72%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || || || |||||||| || || || ||| | ||||| || |||| Sbjct 204 AATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACTTTGGATGTGGAGCCATC 263 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | |||||| | || || ||||||||||||||||| || ||||| ||||| Sbjct 264 TGACACGATTGAAAACGTGAAGGCCAAGATTCAAGATAAGGAAGGTATCCCTCCCGATCA 323 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | | |||||| | || || || |||||||| || || || | | || || || Sbjct 324 ACAGAGACTGATTTTCGCTGGAAAGCAGCTTGAAGACGGCAGGACCCTCTCTGACTACAA 383 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 |||| | ||||| | || || || || || | |||||||||||| Sbjct 384 TATTCAGAAGGAATCCACCCTGCATTTGGTGCTCAGACTGAGAGGA 429 >seq10818 Length=497 Score = 120 bits (132), Expect = 1e-21 Identities = 162/226 (72%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || || || |||||||| || || || ||| | ||||| || |||| Sbjct 294 AATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACTTTGGATGTGGAGCCATC 235 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | |||||| | || || ||||||||||||||||| || ||||| ||||| Sbjct 234 TGACACGATTGAAAACGTGAAGGCCAAGATTCAAGATAAGGAAGGTATCCCTCCCGATCA 175 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | | |||||| | || || || |||||||| || || || | | || || || Sbjct 174 ACAGAGACTGATTTTCGCTGGAAAGCAGCTTGAAGACGGCAGGACCCTCTCTGACTACAA 115 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 |||| | ||||| | || || || || || | |||||||||||| Sbjct 114 TATTCAGAAGGAATCCACCCTGCATTTGGTGCTCAGACTGAGAGGA 69 >seq8188 Length=937 Score = 120 bits (132), Expect = 1e-21 Identities = 162/226 (72%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || || || |||||||| || || || ||| | ||||| || |||| Sbjct 644 AATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACTTTGGATGTGGAGCCATC 703 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | |||||| | || || ||||||||||||||||| || ||||| ||||| Sbjct 704 TGACACGATTGAAAACGTGAAGGCCAAGATTCAAGATAAGGAAGGTATCCCTCCCGATCA 763 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | | |||||| | || || || |||||||| || || || | | || || || Sbjct 764 ACAGAGACTGATTTTCGCTGGAAAGCAGCTTGAAGACGGCAGGACCCTCTCTGACTACAA 823 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 |||| | ||||| | || || || || || | |||||||||||| Sbjct 824 TATTCAGAAGGAATCCACCCTGCATTTGGTGCTCAGACTGAGAGGA 869 >seq4283 Length=919 Score = 120 bits (132), Expect = 1e-21 Identities = 162/226 (72%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || || || |||||||| || || || ||| | ||||| || |||| Sbjct 716 AATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACCATCACTTTGGATGTGGAGCCATC 657 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | |||||| | || || ||||||||||||||||| || ||||| ||||| Sbjct 656 TGACACGATTGAAAACGTGAAGGCCAAGATTCAAGATAAGGAAGGTATCCCTCCCGATCA 597 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | | |||||| | || || || |||||||| || || || | | || || || Sbjct 596 ACAGAGACTGATTTTCGCTGGAAAGCAGCTTGAAGACGGCAGGACCCTCTCTGACTACAA 537 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 |||| | ||||| | || || || || || | |||||||||||| Sbjct 536 TATTCAGAAGGAATCCACCCTGCATTTGGTGCTCAGACTGAGAGGA 491 >seq13023 Length=2091 Score = 114 bits (126), Expect = 5e-20 Identities = 187/267 (70%), Gaps = 3/267 (1%) Strand=Plus/Minus Query 451191 AAGGAAAGCCCTATATTCAAGTA--AATTAT-AAAGGTGAAACTAAAACTTTTGCTCCTG 451247 |||||| ||| | | |||||| ||| | ||||||| |||| | || | || | Sbjct 1661 AAGGAAGGCCACACGTGCAAGTAGAAATGAAGAAAGGTGTGACTAGACTCCTTTCCCCCG 1602 Query 451248 AAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTT 451307 ||||||| || | || |||| | || ||||||||| |||||| | || | || Sbjct 1601 AAGAAATATCTGCCATCATTCTCATGAAGATGAAAGAAGTGGCAGAAAACTACCTAGGCA 1542 Query 451308 CTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAG 451367 ||| |||||||||| || || || ||||| ||||| ||||||||| |||| | Sbjct 1541 GGGAAGTGCAGCATGCAGTAATCACAGTCCCAGCTTACTTCAACGATGCACAAAGGCAGG 1482 Query 451368 CAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTA 451427 |||| ||||||||||| || |||||||| | | || || | || || ||||| || | Sbjct 1481 CAACGAAAGATGCAGGGCAGATTGCTGGCCTGGAAGTACTGAGGATAATCAATGAGCCAA 1422 Query 451428 CAGCAGCTGCTCTAGCATATGGACTAG 451454 | || |||||| | || || ||||||| Sbjct 1421 CTGCTGCTGCTATTGCCTACGGACTAG 1395 >seq33948 Length=1889 Score = 109 bits (120), Expect = 2e-18 Identities = 191/278 (69%), Gaps = 9/278 (3%) Strand=Plus/Minus Query 451319 GATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGAT 451378 || || || || ||||| || || || |||||||||||||| | ||||| ||||| ||| Sbjct 1616 GAGGCTGTTATCACTGTCCCTGCCTACTTCAATGATGCACAGAGACAAGCTACTAAGGAT 1557 Query 451379 GCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCT 451438 || ||| | ||||| ||| | ||| ||||||||||||| ||||| || |||||| Sbjct 1556 GCTGGAAAGATTGCAAATTTGGAAGTTAAGAGAATTATTAATGAGCCTACTGCTGCTGCT 1497 Query 451439 CTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGAT 451498 || || | ||||| | | ||| || || | || || || | ||| Sbjct 1496 CTGGCTTTCGGACT-------TGACAAG--ACTGACGGCAAGGTCATCGCTGTTTACGAT 1446 Query 451499 TTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTA 451558 |||| || |||||| |||| ||| | ||| || || ||| || || ||||| Sbjct 1445 CTTGGAGGTGGAACTTTCGATATCTCTCTGCTTGAGATCTCAGGTGGTGTGTTCGAAGTG 1386 Query 451559 AAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGA 451596 ||||| ||||||||||||||| || ||||| || || Sbjct 1385 AAGGCTACCAATGGTGATACTTCCCTTGGAGGAGAGGA 1348 >seq29885 Length=2322 Score = 104 bits (114), Expect = 9e-17 Identities = 190/278 (68%), Gaps = 9/278 (3%) Strand=Plus/Minus Query 451319 GATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGAT 451378 || || || || ||||| || || || ||||| |||||||| | ||||| ||||| ||| Sbjct 1616 GAGGCTGTCATCACTGTCCCTGCCTACTTCAACGATGCACAGAGACAAGCTACTAAGGAT 1557 Query 451379 GCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCT 451438 || ||| | ||||| ||| | ||| ||||||||||||| ||||| || |||||| Sbjct 1556 GCTGGAAAGATTGCAAATTTGGAAGTTAAGAGAATTATTAATGAGCCTACTGCCGCTGCT 1497 Query 451439 CTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGAT 451498 || || | ||||| | | ||| || || | || || || | ||| Sbjct 1496 CTGGCTTTCGGACT-------TGACAAG--ACTGACGGCAAGGTCATCGCCGTGTACGAT 1446 Query 451499 TTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTA 451558 |||| || |||||| |||| ||| | ||| || || ||| || || ||||| Sbjct 1445 CTTGGAGGTGGAACTTTCGATATCTCTCTTCTTGAGATCTCAGGTGGTGTGTTCGAAGTG 1386 Query 451559 AAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGA 451596 ||||| ||||||||||||||| || ||||| || || Sbjct 1385 AAGGCTACCAATGGTGATACTTCCCTCGGAGGAGAGGA 1348 >seq15986 Length=339 Score = 91.5 bits (100), Expect = 6e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 391059 TTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATT 391118 ||||| || || || || || || || || || ||||||||||| |||| || | |||| Sbjct 337 TTCGTGAAGACCCTCACCGGCAAGACCATCACCCTTGATGTTGAGCCATCAGACACCATT 278 Query 391119 GAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTA 391178 || | |||| || || | || |||||||| || ||||| || ||| | | | Sbjct 277 GAGAATGTTAAGGCCAAGATCTAGGACAAGGAAGGCATCCCTCCCGACCAATAGAGACTC 218 Query 391179 ATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAG 391238 || || | || || || ||||| ||||| ||||| ||| | || || || || | ||| Sbjct 217 ATCTTTGCTGGAAAGCAGCTTGAGGATGGCAGAACCTTGTCTGACTACAACATCCAAAAG 158 Query 391239 GATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || |||| || || || || | || |||||||| Sbjct 157 GAATCAACCCTCCATTTGGTGCTGAGGCTGAGAGG 123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1974644635329144