Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq19111 260 2e-64 seq32716 123 3e-23 seq13023 111 2e-19 >seq19111 Length=2178 Score = 260 bits (288), Expect = 2e-64 Identities = 1055/1648 (64%), Gaps = 17/1648 (1%) Strand=Plus/Minus Query 6509 TTCATTTGATAACAGTAGTTTTCGAGACCATTCTTCGCCTCGACCTTTTTCGCGTACTTT 6568 ||||| || | |||||||| || || |||||||| ||||| || | ||| | ||| Sbjct 1784 TTCATCTGGAAGCAGTAGTTCTCTAGGCCATTCTTTGCCTCAACTCTCTTCTTGATCTTC 1725 Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 || ||||| | |||||||| || || || | |||||| | ||||| || || || Sbjct 1724 TCGTCTTCTCCCTTATACTTCTCAGCTTCATTGACCATTCTCTCAATTTCGTCCTTGCTC 1665 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | | ||||| ||||| || || || ||||| | || || || | | | || || || Sbjct 1664 AGACGTCCCTTCTCATTAGTGATAGTGATCTTATTAGACTTGCCAGTGCCTTTGTCAGCA 1605 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 ||| ||||||| || || || ||||||| |||||| | || | || || || | Sbjct 1604 GCAGACACATTCATGATTCCGTTGGCATCAATATCGAAAGTGACTTCGATCTGGGGAACA 1545 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || || || || | |||||||| || | ||| | ||||| | ||| ||| | Sbjct 1544 CCTCTGGGAGCAGGGGGAATACCTTCCAAGTTGAATTTTCCAAGCATGTGGTTGTCCTTG 1485 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | | | | | || ||||||||||| | || ||| | || || || || Sbjct 1484 GTCATGCTTCTCTCGCCTTCATAGACCTAGATGAGCACACCTGGCTGGTTGTCAGCGTAG 1425 Query 6869 GTTGAGAAGAT-TTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGT 6927 || | |||||| | | || ||||| | || || || || || | || || | | || Sbjct 1424 GTAGTGAAGATCTAGCTC-TTCTTCGTGGGGATGGTGGTGTTACGTGGGATGAGCACAGT 1366 Query 6928 CATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAG 6987 ||| | ||||| ||| || | ||| || || ||||| | ||||| | ||| | ||| Sbjct 1365 CATGACTCCACCAGCAGTCTCAATTCCGAGGGAAAGAGGGGCAACGTCGAGGAGGAGCAG 1306 Query 6988 GTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTA 7047 ||| | || || || || ||||| || | |||||| ||||| || | || ||||| Sbjct 1305 GTCCTTCACGTTTTGGTCACCCTCACCAGTCAGGATGGCAGCTTGCACGGCAGCACCGTA 1246 Query 7048 TGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGA 7107 || || |||||||| ||||| || | | | ||||| || || || || | || | Sbjct 1245 AGCCACAGCCTCATCTGGGTTGATTGATCTGTTCAGAGTCTTGCCATTGAAGAAGTCAGT 1186 Query 7108 TAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCAC 7167 | |||||| || || || ||||||| ||| || |||||||| | || | ||| | | Sbjct 1185 CAGCATTTGCTGGATCTTAGGGATTCTTGTGGAACCACCGACAAGCACAACTTCGTGAAT 1126 Query 7168 TTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACG 7227 || ||| | | |||||| || |||||||| || ||| || || | Sbjct 1125 TTGACCTTTGGCAAGTCCTGAGTCCTTGAGCACGTTTTCGACGGGAGGCATGCACTTTCT 1066 Query 7228 GAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATG--GATGTATAGAAATCA 7285 |||||||||||| || ||| || || || | | ||| |||| | ||| || Sbjct 1065 GAACAAGTCCATGTTCAATTCTTCGAACTTAGCTCTTGAGATGTTGATG--TTGAAGTCC 1008 Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGC 7345 | || || | | || ||||| | | ||| | | ||| | ||| | Sbjct 1007 TCACCCTCAGCCAGGGTCTCGCACTCAATAGGAGCTTGATGGGCAGCAGAGAGAATTCTC 948 Query 7346 TTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATC- 7404 ||||| ||| ||| |||| | | | || | | |||| || ||| || Sbjct 947 TTTGCCTTCTCGCACTGGGTTCTCAGTCTTCTGGTAGCTCTCTGGTTCTTGGTAATGTCG 888 Query 7405 -TTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT-GTCGAAGGAGTCTCGAATCGAAA 7462 || | | | | | || || || | | ||| ||| | ||||| |||||| Sbjct 887 ATTCCAGACTTCTTC--TTGAATTCAGCTATGCAGTACTCG-ACAAGTCTGTTATCGAAG 831 Query 7463 TCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCA 7522 || ||||||||||| || || | || || || || |||||||||||||| ||||| Sbjct 830 TCCTCACCACCCAAATGGGTGTGTCCATTAGTTGCCTTCACTTCAAAGATACCCTCTTCA 771 Query 7523 ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTA 7582 || | | || |||||| || || ||||| |||| || || ||||| |||||| | Sbjct 770 ATAGTGAGCAGACTAACATCGAAAGTGCCACCTCCCAAATCGAAGATGAGAACGTTCTTC 711 Query 7583 TCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATA 7642 || | | ||||| || || ||||| || || || || || ||||| || || || Sbjct 710 TCTTGCTGGGACTTCTTGTCAAGTCCGTATGCAATGGCAGCAGCAGTTGGCTCGTTGATG 651 Query 7643 ATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGA 7701 || | || ||| |||| ||| ||||||| | | || || || || || |||| || Sbjct 650 ATTCTGAGCACA-TTCAAGCCTGCAATAGCTCCAGCGTCCTTGGTTGCCTGTCTCTGGCT 592 Query 7702 ATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGA 7761 ||| || |||||||| || || || || || || | | | || |||| ||||| Sbjct 591 ATCATTGAAGTAGGCTGGCACAGTGACAACTGCATTCTTCACAGTCTTTGATAGATAGTT 532 Query 7762 TTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTG 7821 || || | || ||||| || | ||||| || |||| || |||| || | Sbjct 531 CTCTGCAACTTCCTTCATCTTCACCAATACCATTGAGGAAACTTCCTCAGGATGGAATTT 472 Query 7822 TTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAAC 7881 || || || || || | | ||| || | || || || | | || | ||| Sbjct 471 CTTGGTCTCTCCCTTGTACTGAACAGAGATGAGTGGCTTGTCTCCTGGGCCCTGCTCAAC 412 Query 7882 CTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGAT 7941 | | ||| || |||||||| || || || | || || || || || ||||| Sbjct 411 TGCGAATGGCCATAGCTTGATATCGTCCTGCACTTGCTTCTCAGAGAATTTCCTGCCGAT 352 Query 7942 AAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGC 8001 || | ||| || || || || ||||| ||||||| | || || |||||||| || | Sbjct 351 GAGTCTCTTGGCGTCGAAGACAGTGTTGGCGGGGTTCCTTGCAGTCTGGTTCTTTGCTGA 292 Query 8002 GTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATT 8061 ||| || || || | || | | ||| || || || ||||| || ||||| || || Sbjct 291 GTCGCCAATGAGTC--TC-TCGTCTTCGGTGAAAGCCACGTATGAGGGGGTGGTGTTGTT 235 Query 8062 CCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATA 8121 || ||||| ||| || || || || ||||||||||||||| || ||||| || || Sbjct 234 GCCCTGGTCATTCTGGATGATCTCCACCTTGTCGTTTTGCCAGACACCTACGCAAGAGTA 175 Query 8122 CGTTGTTCCTAAATCAATACCGATTGCT 8149 ||| || || ||||| || || |||||| Sbjct 174 CGTAGTGCCCAAATCGATTCCAATTGCT 147 >seq32716 Length=2259 Score = 123 bits (136), Expect = 3e-23 Identities = 779/1227 (63%), Gaps = 37/1227 (3%) Strand=Plus/Minus Query 6585 ACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTATCAT 6644 |||| || |||||| || ||| |||||| || || || | ||| |||||||||| Sbjct 1810 ACTTCTCAGCATCTCTGATCATAGCTTCAATCTCCTCCTTGCTCAGTCTTCCCTTATCAT 1751 Query 6645 TCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCAAAA 6704 |||| || ||||| | || | || || | | |||| || | ||||| ||| ||| | Sbjct 1750 TCGTGATAGTAATACTCTCCTACTTGCCTGTGCCCTTCTCCACTGCACTGACACTCAGGA 1691 Query 6705 TACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGCTG 6764 ||| || |||||| ||||| | || | || ||||| ||| || || || | || Sbjct 1690 TACTGTTCTCATCAATTTCGAATGTGACTTCGATCTGTGGCACACCTCTGGGAGCAGGTG 1631 Query 6765 GAATACCCGTTAAATCAAATGTACC-AAGTAAACTGTTATCCGTCGCCTTCTTACGTTCA 6823 | || || || | ||| ||| | || |||| ||| ||| | | | | ||| || Sbjct 1630 GGATGCCAGTGAGATCGAATTTGCCTAAGT-TGTGGTTGTCCTTGGTCATGGCACGCTCT 1572 Query 6824 CCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGT 6883 || || | || | || ||||| | | || | ||||| || | |||| | ||| Sbjct 1571 CCCTCGAACACCTGGATAGTCACAGTCTGCTGCTGGTCTTGGTAAGTAGTGAAGGTCTGT 1512 Query 6884 TCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATA 6943 |||||| | ||| || ||| ||| | |||| | ||||||| ||||||| | Sbjct 1511 GATTTCTTTGCTGGGATAACAGTACCTCTGGTGATAATCTTAGTCATAACTCCACCCACA 1452 Query 6944 GTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTC- 7002 || || | ||| || | || |||||||| || | || || | |||| | ||| Sbjct 1451 GTCTCAATTCCCAGTGTCAATGGTGTCACATCAATAAGCAAAATATCTTTAGTCTCTTCT 1392 Query 7003 --GTTCCCTTCACCCGTTAAG-ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTC 7059 | || || | || ||| || | | || || | || || || || || ||||| Sbjct 1391 GAGGTCTCTCCTCC----AAGAATACCTCCCTGCACTGCTGCTCCATACGCAACTGCCTC 1336 Query 7060 ATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTG 7119 ||| ||||| || | | ||| | || || || || || | ||| | | ||| || Sbjct 1335 ATCAGGGTTGATGCCTCTGTTCGGCTCCTTTCCATTGAAGAAGTCCTTGATGAGTTGCTG 1276 Query 7120 AATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGAT-TTAT 7178 | ||| ||||| ||||| || |||||||| | || | ||| ||| ||||| | || | Sbjct 1275 CACTTTGGGGATACGTGTGGAACCACCGACAAGCACAACTTC-GTCAATTTCGCTCTTTT 1217 Query 7179 CGATCTTTGAGTC-TCGAAG-TGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTC 7236 || | ||| |||| | | ||| | || || |||| ||| ||| | ||| Sbjct 1216 TCATGCCGGCGTCGTCGAGGACGGTTTGT--ACGGGGTCCAGGGTTTTCTTGAAGAGGTC 1159 Query 7237 CATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTA 7296 || || || || ||||| ||||| || || | | ||| |||| ||||| Sbjct 1158 GGCGCAGAGCTCTTCGAAACGGGCACGAGTGATTGTCTCACTGAAGTCAATTCCGTC--- 1102 Query 7297 TAACGA-ATCAATTTCAATGGTTGTTTGTG-CCGTCGAA--GA-TAACGTTCGCTTTGCG 7351 || || ||| |||||| || ||| | | | | | || || | || || | || Sbjct 1101 -AATGAGATC---TTCAATAGTGATTTTAGTCTGATGTACTGAGGAAAGGTCTCTCTTCG 1046 Query 7352 CGCTCAC-ACGCCGTTCGTAAACGACGA-AGGGCACGCGGGTTACCGGAAATATCTTTCT 7409 | || | || | || | | | | | | || | | | || |||||| || | Sbjct 1045 CCTTCTCTACCTCACTCTTCAGCTTCTACATAGCTCTCACATCACTCTTAATATCCTTTT 986 Query 7410 TATGTTTACGTTTAAAC-TCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCA 7468 ||||| || ||| ||| | | ||||| | ||| | | || || ||||| Sbjct 985 CGTGTTTCTTCTTGAACACCTTGACA-AAGTGCTCAGTGAGGCGCTGGTCAAAGTCTTCT 927 Query 7469 CCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTT 7528 || ||||| || ||||| || || || || ||||||||| | || || ||| | Sbjct 926 CCTCCCAAATGGGTATCTCCGGCAGTTGCGACGACTTCAAACACTCCGTTATCGATGGTC 867 Query 7529 AACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCG 7588 | | || || || || ||||| || |||| || || | || || ||| | || Sbjct 866 AGGAGAGACACGTCGAAGGTACCTCCTCCCAAATCGAACACGATCACATTC---TTCTCA 810 Query 7589 TCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATAC-G 7647 ||| |||||||| | |||||| || || || || || ||||| ||||| || || | | Sbjct 809 CCTTGTTTCTTATCCATACCGTAGGCAATTGCAGCAGCAGTTGGCTCATTGATGATCCTG 750 Query 7648 AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTT 7707 | ||| | |||||||| ||| | | ||||| || || ||||| ||||| | |||||| Sbjct 749 AGTACA-TCCAGGCCAGAAATGAGTCCAGCATCCTTAGTAGCTTGGCGTTGGGCATCGTT 691 Query 7708 AAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGC 7767 ||||| || || || || | ||| || | |||| | || ||||| ||| || Sbjct 690 GAAGTAAGCAGGCACAGTAATGACTGCATGTTGCACTTCTCTGCCAAGATAGTTTTCTGC 631 Query 7768 GATATCTTTCATTTTGGTAAGAACCAT 7794 ||| || ||||| ||||| |||| ||| Sbjct 630 GATTTCCTTCATCTTGGTGAGAATCAT 604 >seq13023 Length=2091 Score = 111 bits (122), Expect = 2e-19 Identities = 239/355 (67%), Gaps = 7/355 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||| ||||| ||||| | ||| ||||| || || || || ||||| |||| ||| Sbjct 1253 TCGAGGTCTTCGCCACCGAGGTGGGTATCGCCTGCAGTGGCAACCACTTCGAAGACACCG 1312 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || || | | || || ||||| || ||||| || || || || || | || | Sbjct 1313 TTCTCGATCATGAGTAAAGAGACATCGAAGGTACCGCCTCCAAGATCGAACACGATGATA 1372 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | | | ||| ||| ||||| || || ||||| || ||||| || || ||||| ||| Sbjct 1373 TGC---TGCTCGCCTTGTTTCTTGTCTAGTCCGTAGGCAATAGCAGCAGCAGTTGGCTCA 1429 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCC--GCATCTTTCGTCGCTTGTC 7694 || || || | || | |||||||||||| |||| ||||||||||| || || | Sbjct 1430 TTGATTATCCTCAGTACTTCCAGGCCAGCAAT--CTGCCCTGCATCTTTCGTTGCCTGCC 1487 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754 ||| | |||||| ||||| || ||||| || | || || | | |||| | | || | Sbjct 1488 TTTGTGCATCGTTGAAGTAAGCTGGGACTGTGATTACTGCATGCTGCACTTCCCTGCCTA 1547 Query 7755 GATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 | || ||| || | |||||||| || | |||| || | || || ||||| Sbjct 1548 GGTAGTTTTCTGCCACTTCTTTCATCTTCATGAGAATGATGGCAGATATTTCTTC 1602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634796036711120