Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq3222 127 3e-24 >seq3222 Length=1589 Score = 127 bits (140), Expect = 3e-24 Identities = 394/604 (65%), Gaps = 7/604 (1%) Strand=Plus/Plus Query 111615 CAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTG 111674 ||| ||||||| ||||| || || || |||||| || ||| | || ||| ||| Sbjct 717 CAGCACATGTTAATGCGTGTGAGTATTGGAATCCATTTAGACGATCTGGAGGCTGCTTTT 776 Query 111675 GAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTTCAA 111733 || ||||| || |||| | ||| ||||| || || ||||| || || ||||| Sbjct 777 GAAACATATGATTTGATGGGAGAGAGGTG-GTTCACACATGCTACACCTACTCTGTTCAA 835 Query 111734 CGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTC 111793 ||||| ||||| | || || ||| | |||||||| | | | ||||| ||||| Sbjct 836 TGCTGGAACACCGAATCCTCAGATGAGCTCGTGTTTCCTGCTGGACATGAAGGATGATTC 895 Query 111794 AATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGG 111853 ||| | || || | | || || | ||||| || || || ||| || || || Sbjct 896 AATTGAAGGAATCTTTGAGACGCTGAAGCAATGTTCCATCATTTCGAAGCATGCAGGAGG 955 Query 111854 TATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAATGG 111913 ||| ||||| ||| || ||||||| | | |||| | || |||||||| Sbjct 956 TATTGGGATAGCCATGCACAGAATCAGAGCGTCTGATAGTTATATTCGTGGAACAAATGG 1015 Query 111914 TCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAA 111973 | || | || | | || ||| | || || | |||| ||| | | || || | Sbjct 1016 ATACTCTAACGGGTTAGTGCCCATGTTGCGAGTCTACAACGATACATCAAGATACGTTGA 1075 Query 111974 CCAAGCTGGGCGTC---GCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGA 112030 ||||| ||| | | ||||| || |||| ||||| |||||||| |||||||| || Sbjct 1076 CCAAGGTGGTGGCAAAAGAAAGGGTTCCTTCGCCGTCTACCTTGAGCCCTGGCACGCCGA 1135 Query 112031 TATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCC-GCG 112089 ||| || |||||| ||||| ||||| || | || || ||| ||| | | Sbjct 1136 CATCTATGACTTCCTTCAGTTGAAGAAGAACCACGGGAAGGAAGAATAGCG-TGCGAGAG 1194 Query 112090 ATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCA 112149 || | |||| ||| | ||| | |||||||| ||||||||||| || |||| |||| Sbjct 1195 ATTTGTTCTATGCTTTGTGGGTGCCAGATCTTTTCATGAAGAGGGTGGAGGTCGATGGCG 1254 Query 112150 ATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGT 112209 ||||| |||| | || ||| | || || || |||| ||| | ||||||| ||| Sbjct 1255 ATTGGACTCTTATGTGCCCAAATGAGTGTCCTGGCCTCTATGATTCATGGGGTGAGTAGT 1314 Query 112210 TTGA 112213 |||| Sbjct 1315 TTGA 1318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620413266860960