Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq16969 95.1 1e-14 >seq16969 Length=3315 Score = 95.1 bits (104), Expect = 1e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 159625 GGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCA 159684 |||||||| ||||| | ||||| ||||| || || |||||| | |||||| || || Sbjct 2377 GGTGGTCAAGTATACATGGATGGAGCAAACCTTAACGCACAGATGGGTCTAACATCCCCC 2436 Query 159685 TGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACAT 159744 | | |||||| ||||| |||| | ||| ||||||||||||||| ||||| || Sbjct 2437 GGATTCATTGGTGCCGATGTTGGTCACTTGAACCTACATAAGACATTCTCAATTCCCCAC 2496 Query 159745 GGAGGTGGAGGTCCTGG 159761 |||||||| ||||| || Sbjct 2497 GGAGGTGGTGGTCCAGG 2513 Score = 89.7 bits (98), Expect = 6e-13 Identities = 147/211 (70%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 157916 CAGTCATACAGCGAAACGTTCTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATC 157975 ||||||| | |||| ||||||||||| || | ||||||||| | ||||| || || | Sbjct 608 CAGTCATCAGGAGAAATGTTCTTGAGAACCCAAATTGGTACACTCCATACACACCTTACC 667 Query 157976 AAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAG 158035 | || ||||| | ||||| | ||||| | || |||| | ||| || | || ||| Sbjct 668 AGGCAGAGATTGCATAGGGACGTTTGGAGTCGTTGCTCAACTTCCAGACTATGGTCTCAG 727 Query 158036 AACTCACAGGACTACCGATAGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAG 158095 ||||||| || | || | ||||| |||| | || || | ||||| ||| ||| Sbjct 728 AACTCACTGGCTTCGAAATGTCTAACGCTAGTCTACTTGACGAGTCTACTGCTGCATCAG 787 Query 158096 AAGCAATGCTGTTAGCATATAAT-TCTACAA 158125 |||||||| || | |||||| || |||| Sbjct 788 AAGCAATGATGATGAGTTATAATGTCCACAA 818 Score = 84.2 bits (92), Expect = 3e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 158564 ATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAA 158623 |||| || ||| | | || || ||||||||||||||||| ||| | || || ||||| | Sbjct 1256 ATAAGGCCTACCGCATGGCTCTGCAGACTAGAGAGCAGCACATCCGTAGGGAGAAAGCGA 1315 Query 158624 CCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATG 158677 | || || || || || ||| | ||||||||||| ||||| |||| || |||| Sbjct 1316 CGAGCAATATTTGTACTGCATAGGCACTGCTGGCAAATATTTCTGCCTTTTATG 1369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587739400552480