Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq19111 114 1e-19 seq32716 107 2e-17 seq39418 96.9 3e-14 seq36835 96.9 3e-14 seq27931 96.9 3e-14 seq25823 96.9 3e-14 seq22711 96.9 3e-14 seq20653 96.9 3e-14 seq16860 96.9 3e-14 seq10818 96.9 3e-14 seq8188 96.9 3e-14 seq4283 96.9 3e-14 seq13023 93.3 3e-13 >seq19111 Length=2178 Score = 114 bits (126), Expect = 1e-19 Identities = 319/487 (66%), Gaps = 2/487 (0%) Strand=Plus/Plus Query 552114 CATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGT 552173 || ||| |||||||||| ||||| || |||||||| ||||| || | ||||| | | | Sbjct 1129 CACGAAGTTGTGCTTGTCGGTGGTTCCACAAGAATCCCTAAGATCCAGCAAATGCTGACT 1188 Query 552174 TCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTAT 552233 | |||||||| || | | || | | || |||||||||||||| || || Sbjct 1189 GACTTCTTCAATGGCAAGACTCTGAACAGATCAATCAACCCAGATGAGGCTGTGGCTTAC 1248 Query 552234 GGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATT 552293 ||||| || | ||||| || || || |||| | ||| |||| | | | | Sbjct 1249 GGTGCTGCCGTGCAAGCTGCCATCCTGACTGGTGAGGGTGACCAAAACGTGAAGGACCTG 1308 Query 552294 GTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACT 552353 | || | || ||| | ||||| || || || | || || | ||| || | |||||| Sbjct 1309 CTCCTCCTCGACGTTGCCCCTCTTTCCCTCGGAATTGAGACTGCTGGTGGAGTCATGACT 1368 Query 552354 AATCTTATCGATAGAAATACTACTATTCCTTGTAAAAA-ATCTCGTGTATTTTCTACGTA 552412 || ||| | || || || || || || || | || | | || |||| || Sbjct 1369 GTGCTCATCCCACGTAACACCACCATCCCCACGAAGAAGAGCTAGA-TCTTCACTACCTA 1427 Query 552413 TTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAA 552472 | || || || | | ||| || | | | |||||| || |||| | || || Sbjct 1428 CGCTGACAACCAGCCAGGTGTGCTCATCTAGGTCTATGAAGGCGAGAGAAGCATGACCAA 1487 Query 552473 AGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGT 552532 || || | ||||| | || || || ||||||||||| |||||||| | || || Sbjct 1488 GGACAACCACATGCTTGGAAAATTCAACTTGGAAGGTATTCCCCCTGCTCCCAGAGGTGT 1547 Query 552533 ACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTG 552592 || || || ||||| ||||||||||| |||||||| ||||| |||||||| ||||| Sbjct 1548 TCCCCAGATCGAAGTCACTTTCGATATTGATGCCAACGGAATCATGAATGTGTCTGCTGC 1607 Query 552593 TGATAAA 552599 ||| ||| Sbjct 1608 TGACAAA 1614 Score = 91.5 bits (100), Expect = 1e-12 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 ||||||| | ||||| ||||| || || ||||| || | || || || || || | Sbjct 557 ATGCAGTTGTCACTGTGCCAGCCTACTTCAATGATAGCCAGAGACAGGCAACCAAGGACG 616 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 ||||| |||||| || | ||||| || | || ||||| || || ||||||||||| Sbjct 617 CTGGAGCTATTGCAGGCTTGAATGTGCTCAGAATCATCAACGAGCCAACTGCTGCTGCCA 676 Query 550518 TTGCATATGGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTG 550577 ||||||| |||||||| || | | ||||| || || |||||||| |||| | Sbjct 677 TTGCATACGGACTTGACAAGAAGTCCCAGCAAGAGAAGAACGTTCTCATCTTCGATTTGG 736 Query 550578 GAGGT 550582 ||||| Sbjct 737 GAGGT 741 >seq32716 Length=2259 Score = 107 bits (118), Expect = 2e-17 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 ||||||| || ||||| || || || || || || | ||||| ||||||||||| |||| Sbjct 662 ATGCAGTCATTACTGTGCCTGCTTACTTCAACGATGCCCAACGCCAAGCTACTAAGGATG 721 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 |||||| ||| |||| || |||| || | || |||||||| || |||||||||||| Sbjct 722 CTGGACTCATTTCTGGCCTGGATGTACTCAGGATCATCAATGAGCCAACTGCTGCTGCAA 781 Query 550518 TTGCATATGGACTTGATAA 550536 |||| || || | ||||| Sbjct 782 TTGCCTACGGTATGGATAA 800 >seq39418 Length=937 Score = 96.9 bits (106), Expect = 3e-14 Identities = 156/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || || | ||| || | ||| ||||| ||| || ||||||||| |||| || || Sbjct 73 CTCAGTCTGAGCACCAAATGCAGGGTGGATTCCTTCTGAATATTGTAGTCAGAGAGGGTC 132 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 || |||||||| || ||||| || ||||| ||||| || ||||| ||||| || ||| Sbjct 133 CTGCCGTCTTCAAGCTGCTTTCCAGCGAAAATCAGTCTCTGTTGATCGGGAGGGATACCT 192 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAG 563432 || ||||||||||| || || || ||||| || |||| || | || || | Sbjct 193 TCCTTATCTTGAATCTTGGCCTTCACGTTTTCAATCGTGTCAG-ATGGCTCCACATCCAA 251 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||| | || || ||||| ||||| || || || || ||||| Sbjct 252 AGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 293 >seq36835 Length=903 Score = 96.9 bits (106), Expect = 3e-14 Identities = 156/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || || | ||| || | ||| ||||| ||| || ||||||||| |||| || || Sbjct 425 CTCAGTCTGAGCACCAAATGCAGGGTGGATTCCTTCTGAATATTGTAGTCAGAGAGGGTC 366 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 || |||||||| || ||||| || ||||| ||||| || ||||| ||||| || ||| Sbjct 365 CTGCCGTCTTCAAGCTGCTTTCCAGCGAAAATCAGTCTCTGTTGATCGGGAGGGATACCT 306 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAG 563432 || ||||||||||| || || || ||||| || |||| || | || || | Sbjct 305 TCCTTATCTTGAATCTTGGCCTTCACGTTTTCAATCGTGTCAG-ATGGCTCCACATCCAA 247 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||| | || || ||||| ||||| || || || || ||||| Sbjct 246 AGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 205 >seq27931 Length=569 Score = 96.9 bits (106), Expect = 3e-14 Identities = 156/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || || | ||| || | ||| ||||| ||| || ||||||||| |||| || || Sbjct 425 CTCAGTCTGAGCACCAAATGCAGGGTGGATTCCTTCTGAATATTGTAGTCAGAGAGGGTC 366 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 || |||||||| || ||||| || ||||| ||||| || ||||| ||||| || ||| Sbjct 365 CTGCCGTCTTCAAGCTGCTTTCCAGCGAAAATCAGTCTCTGTTGATCGGGAGGGATACCT 306 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAG 563432 || ||||||||||| || || || ||||| || |||| || | || || | Sbjct 305 TCCTTATCTTGAATCTTGGCCTTCACGTTTTCAATCGTGTCAG-ATGGCTCCACATCCAA 247 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||| | || || ||||| ||||| || || || || ||||| Sbjct 246 AGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 205 >seq25823 Length=903 Score = 96.9 bits (106), Expect = 3e-14 Identities = 156/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || || | ||| || | ||| ||||| ||| || ||||||||| |||| || || Sbjct 425 CTCAGTCTGAGCACCAAATGCAGGGTGGATTCCTTCTGAATATTGTAGTCAGAGAGGGTC 366 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 || |||||||| || ||||| || ||||| ||||| || ||||| ||||| || ||| Sbjct 365 CTGCCGTCTTCAAGCTGCTTTCCAGCGAAAATCAGTCTCTGTTGATCGGGAGGGATACCT 306 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAG 563432 || ||||||||||| || || || ||||| || |||| || | || || | Sbjct 305 TCCTTATCTTGAATCTTGGCCTTCACGTTTTCAATCGTGTCAG-ATGGCTCCACATCCAA 247 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||| | || || ||||| ||||| || || || || ||||| Sbjct 246 AGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 205 >seq22711 Length=903 Score = 96.9 bits (106), Expect = 3e-14 Identities = 156/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || || | ||| || | ||| ||||| ||| || ||||||||| |||| || || Sbjct 425 CTCAGTCTGAGCACCAAATGCAGGGTGGATTCCTTCTGAATATTGTAGTCAGAGAGGGTC 366 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 || |||||||| || ||||| || ||||| ||||| || ||||| ||||| || ||| Sbjct 365 CTGCCGTCTTCAAGCTGCTTTCCAGCGAAAATCAGTCTCTGTTGATCGGGAGGGATACCT 306 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAG 563432 || ||||||||||| || || || ||||| || |||| || | || || | Sbjct 305 TCCTTATCTTGAATCTTGGCCTTCACGTTTTCAATCGTGTCAG-ATGGCTCCACATCCAA 247 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||| | || || ||||| ||||| || || || || ||||| Sbjct 246 AGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 205 >seq20653 Length=689 Score = 96.9 bits (106), Expect = 3e-14 Identities = 156/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || || | ||| || | ||| ||||| ||| || ||||||||| |||| || || Sbjct 617 CTCAGTCTGAGCACCAAATGCAGGGTGGATTCCTTCTGAATATTGTAGTCAGAGAGGGTC 558 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 || |||||||| || ||||| || ||||| ||||| || ||||| ||||| || ||| Sbjct 557 CTGCCGTCTTCAAGCTGCTTTCCAGCGAAAATCAGTCTCTGTTGATCGGGAGGGATACCT 498 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAG 563432 || ||||||||||| || || || ||||| || |||| || | || || | Sbjct 497 TCCTTATCTTGAATCTTGGCCTTCACGTTTTCAATCGTGTCAG-ATGGCTCCACATCCAA 439 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||| | || || ||||| ||||| || || || || ||||| Sbjct 438 AGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 397 >seq16860 Length=798 Score = 96.9 bits (106), Expect = 3e-14 Identities = 156/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || || | ||| || | ||| ||||| ||| || ||||||||| |||| || || Sbjct 425 CTCAGTCTGAGCACCAAATGCAGGGTGGATTCCTTCTGAATATTGTAGTCAGAGAGGGTC 366 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 || |||||||| || ||||| || ||||| ||||| || ||||| ||||| || ||| Sbjct 365 CTGCCGTCTTCAAGCTGCTTTCCAGCGAAAATCAGTCTCTGTTGATCGGGAGGGATACCT 306 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAG 563432 || ||||||||||| || || || ||||| || |||| || | || || | Sbjct 305 TCCTTATCTTGAATCTTGGCCTTCACGTTTTCAATCGTGTCAG-ATGGCTCCACATCCAA 247 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||| | || || ||||| ||||| || || || || ||||| Sbjct 246 AGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 205 >seq10818 Length=497 Score = 96.9 bits (106), Expect = 3e-14 Identities = 156/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || || | ||| || | ||| ||||| ||| || ||||||||| |||| || || Sbjct 73 CTCAGTCTGAGCACCAAATGCAGGGTGGATTCCTTCTGAATATTGTAGTCAGAGAGGGTC 132 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 || |||||||| || ||||| || ||||| ||||| || ||||| ||||| || ||| Sbjct 133 CTGCCGTCTTCAAGCTGCTTTCCAGCGAAAATCAGTCTCTGTTGATCGGGAGGGATACCT 192 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAG 563432 || ||||||||||| || || || ||||| || |||| || | || || | Sbjct 193 TCCTTATCTTGAATCTTGGCCTTCACGTTTTCAATCGTGTCAG-ATGGCTCCACATCCAA 251 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||| | || || ||||| ||||| || || || || ||||| Sbjct 252 AGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 293 >seq8188 Length=937 Score = 96.9 bits (106), Expect = 3e-14 Identities = 156/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || || | ||| || | ||| ||||| ||| || ||||||||| |||| || || Sbjct 865 CTCAGTCTGAGCACCAAATGCAGGGTGGATTCCTTCTGAATATTGTAGTCAGAGAGGGTC 806 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 || |||||||| || ||||| || ||||| ||||| || ||||| ||||| || ||| Sbjct 805 CTGCCGTCTTCAAGCTGCTTTCCAGCGAAAATCAGTCTCTGTTGATCGGGAGGGATACCT 746 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAG 563432 || ||||||||||| || || || ||||| || |||| || | || || | Sbjct 745 TCCTTATCTTGAATCTTGGCCTTCACGTTTTCAATCGTGTCAG-ATGGCTCCACATCCAA 687 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||| | || || ||||| ||||| || || || || ||||| Sbjct 686 AGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 645 >seq4283 Length=919 Score = 96.9 bits (106), Expect = 3e-14 Identities = 156/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || || | ||| || | ||| ||||| ||| || ||||||||| |||| || || Sbjct 495 CTCAGTCTGAGCACCAAATGCAGGGTGGATTCCTTCTGAATATTGTAGTCAGAGAGGGTC 554 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 || |||||||| || ||||| || ||||| ||||| || ||||| ||||| || ||| Sbjct 555 CTGCCGTCTTCAAGCTGCTTTCCAGCGAAAATCAGTCTCTGTTGATCGGGAGGGATACCT 614 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAG 563432 || ||||||||||| || || || ||||| || |||| || | || || | Sbjct 615 TCCTTATCTTGAATCTTGGCCTTCACGTTTTCAATCGTGTCAG-ATGGCTCCACATCCAA 673 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||| | || || ||||| ||||| || || || || ||||| Sbjct 674 AGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 715 >seq13023 Length=2091 Score = 93.3 bits (102), Expect = 3e-13 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||||||||| || || ||||| || || || || ||||| | || || || ||||||| Sbjct 1529 ATGCAGTAATCACAGTCCCAGCTTACTTCAACGATGCACAAAGGCAGGCAACGAAAGATG 1470 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 | || | |||||||| || | || || | || |||||||| || ||||||||||| Sbjct 1469 CAGGGCAGATTGCTGGCCTGGAAGTACTGAGGATAATCAATGAGCCAACTGCTGCTGCTA 1410 Query 550518 TTGCATATGGACTTGATAA 550536 |||| || ||||| || || Sbjct 1409 TTGCCTACGGACTAGACAA 1391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4027052744854820