Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq25860 190 4e-43 >seq25860 Length=1350 Score = 190 bits (210), Expect = 4e-43 Identities = 392/580 (68%), Gaps = 16/580 (3%) Strand=Plus/Minus Query 48101 TTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCC 48160 || ||| ||||||||| |||||||| ||| ||||| | |||||| ||||||||| Sbjct 988 TTATTGTTCAGGTGCTT---ATAGAGCAAGCAAGCAAATTGTGTGTGCATGCCTTCGTCT 932 Query 48161 CGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAG 48220 | |||||| || | || |||||| ||| |||||||| | |||||||| ||||||||| Sbjct 931 CTGCTGATAAGTTCATTCGAGAAGGTGAGTCCAGGCATAAGCCCCCTCTTCTTGAGCCAG 872 Query 48221 AAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGC 48280 || || | ||| ||| || |||||||| || || |||||||| ||||| ||| Sbjct 871 AAGATCGAGCAGAAGCTGCCCGAAAAGAAGATTCCTTCTACTGCCGCAAACGCTACGAGT 812 Query 48281 CTCTCTCCGAAAGAAGCGTTCTTGTCTGA---GATCCAGGAAAGCGCCCAGTCTGCCTTC 48337 |||||| || | | | ||||| || |||||| || |||||||| |||||| Sbjct 811 CTCTCTGCGTA------GCTATTGTCGGAGCTGATCCAACGCAGGGCCCAGTCAGCCTTC 758 Query 48338 TTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAG--CTTCTTGCACTCACCTGCGT 48395 ||||| | | || || | ||| |||| |||||| |||| ||| | || Sbjct 757 TTCTTCACGACGGGGATGTTGTCTGTGGCTTTGAAGAGGAAGTCTT--TCTCGTTTTGGT 700 Query 48396 CCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGA 48455 | | ||||| || ||| | ||| |||||||||| | || || || | Sbjct 699 CGTTGATGTAGGTGTCGATTAGCAGGGAGTAGGTCTCAGAGTGGATGTTTTCCATCATCA 640 Query 48456 TCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCA 48515 ||| ||| ||||||||| || || ||| |||||| | || ||| |||||||| Sbjct 639 TCTAGAAGCCGTAGAAGCACCGCGCTTCAGGCACCTGGATCTCGGTGCAGAATCTCATAG 580 Query 48516 GCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGA 48575 || |||||| || || || ||||| || || |||||||| || || | || | || Sbjct 579 CCAAGTTCTCAAGAACGATGCCGTCTGATGCGGCGAAGAAGGCTAGCACGTACTTGATGA 520 Query 48576 AATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTT 48635 | || | |||||||| |||||| | ||| | | | ||| | ||| || | || Sbjct 519 AGTGTCTCTCGTTGTCGGTGAGTCTCTCCCAATCTTTGAGGTCCTGAGCCAAATCGATTT 460 Query 48636 CTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACAT 48675 |||| ||||||||||| | || | | ||||||||| Sbjct 459 CTTCGGCAGTCCAGAAGCATGCAACCTGATCTTTGTACAT 420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931038878021120