Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq25860 120 6e-22 >seq25860 Length=1350 Score = 120 bits (132), Expect = 6e-22 Identities = 381/578 (66%), Gaps = 17/578 (3%) Strand=Plus/Plus Query 25469 ACAAAGATATATGGGAGATGTACAA-GA--AGGCTCAAAACTCAAACTGGACCGCCGAAG 25525 |||| ||||| ||| |||||||||| || ||| | | || |||||| ||||||| Sbjct 403 ACAATGATATCTGGAAGATGTACAAAGATCAGGTTGCATGCTT---CTGGACTGCCGAAG 459 Query 25526 AGATTGATCTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATT 25585 | || ||| |||| ||||| | | | ||| | || || | ||||| || | Sbjct 460 AAATCGATTTGGCTCAGGACCTCAAAGATTGGGAGAGACTCACCGACAACGAGAGACACT 519 Query 25586 TTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGT 25645 | ||||||||||| | || ||||| || || || || || || || ||||| || Sbjct 520 TCATCAAGTACGTGCTAGCCTTCTTCGCCGCATCAGACGGCATCGTTCTTGAGAACTTG- 578 Query 25646 GCGA-GAGATTCACCAGGGAAGTGCAG-TACGTGGAGGCCAAGTGTTTCTACGGTTTCCA 25703 || | ||||||| || || | ||| | | || || | ||| |||||||| ||| | Sbjct 579 GCTATGAGATTCTGCACCGAGATCCAGGTGCCTGAAGCGCG-GTGCTTCTACGGCTTCTA 637 Query 25704 GATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTAC 25763 |||| || ||||| | ||||||||| || || ||| | || ||||| | Sbjct 638 GATGATGATGGAAAACATCCACTCTGAGACCTACTCCCTGCTAATCGACACCTACATCAA 697 Query 25764 AGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAG 25823 ||| ||||| ||| || || |||| || |||| ||| | | |||| Sbjct 698 CGACCAAAACGAGAAAGACTTCCTCTTCAAAGCCACAGACAACATCCCCGTCGTGAAGAA 757 Query 25824 GAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGC-GCTACGTTTGGCGAGCGGC 25882 |||||| |||||| || ||||||| | | | | |||||| ||| | | Sbjct 758 GAAGGCTGACTGGGCCCTGCGTTGGATCAGCTCCGACAATAGCTACGCA----GAGAGAC 813 Query 25883 TGGTAGCCTTTGCTGCTGTGGAGGGCATCTT-TTTCAGCGGTTCGTTTGCGGCCATCTTC 25941 | ||||| ||||| || || || || ||||| ||| | | | | ||| | |||||| Sbjct 814 TCGTAGCGTTTGCGGCAGTAGAAGGAATCTTCTTTTCGGGCAGCTTCTGCT-CGATCTTC 872 Query 25942 TGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGG 26001 ||||||||| ||| |||| ||||| || || ||| || || || || |||||||| Sbjct 873 TGGCTCAAGAAGAGGGGGCTTATGCCTGGACTCACCTTCTCGAATGAACTTATCAGCAGA 932 Query 26002 GACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTA 26039 ||||| || | |||| | | ||||| ||| ||||||| Sbjct 933 GACGAAGGCATGCACACACAATTTGCTTGCTTGCTCTA 970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928352303265920