Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq3222 134 7e-27 >seq3222 Length=1589 Score = 134 bits (148), Expect = 7e-27 Identities = 197/279 (71%), Gaps = 0/279 (0%) Strand=Plus/Minus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947 |||||| || | | | |||||| ||| ||| || ||| ||| || | |||||| Sbjct 1277 ATTTGGGCACATAAGAGTCCAATCGCCATCGACCTCCACCCTCTTCATGAAAAGATCTGG 1218 Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007 | ||||| ||||| || ||||||||||| | | |||||| || ||||| ||||| || Sbjct 1217 CACCCACAAAGCATAGAACAAATCTCTCGCACGCTATTCTTCCTTCCCGTGGTTCTTCTT 1158 Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067 | | | ||| ||| | || || | |||||| || || | |||| || || ||| Sbjct 1157 CAACTGAAGGAAGTCATAGATGTCGGCGTGCCAGGGCTCAAGGTAGACGGCGAAGGAACC 1098 Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127 |||||||| || |||||||| || |||||||||| || || ||| | ||| |||||| Sbjct 1097 CTTTCTTTTGCCACCACCTTGGTCAACGTATCTTGATGTATCGTTGTAGACTCGCAACAT 1038 Query 26128 TGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAAT 26166 || ||||| || | || |||| ||||| | | |||| Sbjct 1037 GGGCACTAACCCGTTAGAGTATCCATTTGTTCCACGAAT 999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252909186069350