Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uroleptopsis_20citrina_20[genbank_20GCA_5F001653735.1_202016-05-31] 42,418 sequences; 32,347,234 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq25860 125 9e-23 >seq25860 Length=1350 Score = 125 bits (138), Expect = 9e-23 Identities = 200/285 (70%), Gaps = 8/285 (3%) Strand=Plus/Minus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 |||||||| | ||||| | ||| || |||| ||| || ||||| || || | |||| Sbjct 940 CCTTCGTCTCTGCTGATAAGTTCATTCGAGAAGGTGAGTCCAGGCATAAGCCCCCTCTTC 881 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| ||||| | |||||| |||||||| || ||||| || || || || ||||| Sbjct 880 TTGAGCCAGAAGATCGAGCAGAAGCTGCCCGAAAAGAAGATTCCTTCTACTGCCGCAAAC 821 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359 | | ||| | ||| || || | | | || | ||||||| || |||||| Sbjct 820 GCTACGAGTCTCTCTGCGTAGCTATTG------TCGGAGCTGATCCAACGCAGGGCCCAG 767 Query 869360 TCGGCCTTTTTCCTCACCGAC-GGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTC 869418 || ||||| ||| ||| |||| || | |||| |||| |||||| ||| || || Sbjct 766 TCAGCCTTCTTCTTCA-CGACGGGGATGTTGTCTGTGGCTTTGAAGAGGAAGTCTTTCTC 708 Query 869419 GGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 | |||| |||| ||||||||||| || || || |||||||| Sbjct 707 GTTTTGGTCGTTGATGTAGGTGTCGATTAGCAGGGAGTAGGTCTC 663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6103658180276506